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JQ823123.1__AFM54746.1__P12024L_26__00026
Bact-VirJQ823123.1__AFM54746.1__P12024L_26__00026
Identity
- Accession:
- JQ823123 ↗
- Kingdom:
- phage
Quality
95.7
mean pLDDT
Taxonomy
TaxID: 1168479
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-53_211-245
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cg8A00 | 3.60.130.30 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › | 0.84 | 69.0 | 4.49e-01 | 87.0% | 72.9% |
| 3itqA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.79 | 60.0 | 4.27e-01 | 79.7% | 85.9% |
| 7zscA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.68 | 61.0 | 4.23e-01 | 98.6% | 93.7% |
| 2okxA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 36.0 | 2.93e-01 | 81.2% | 93.5% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4302765 | 10.12.1.47 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Tet_JBP | 0.97 | 93.0 | 5.77e-01 | 100.0% | 65.7% |
| 3594800 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.97 | 89.0 | 5.58e-01 | 95.7% | 70.3% |
| 3708500 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.93 | 87.0 | 4.78e-01 | 98.6% | 25.2% |
| 4110857 | 10.12.1.47 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Tet_JBP | 0.91 | 86.0 | 5.59e-01 | 100.0% | 82.0% |
| 3600503 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.91 | 85.0 | 5.58e-01 | 100.0% | 83.6% |
| 1684447 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.82 | 68.0 | 4.47e-01 | 88.4% | 73.0% |
| 1827785 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.79 | 60.0 | 4.21e-01 | 79.7% | 77.2% |
| 3738564 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.78 | 70.0 | 4.70e-01 | 100.0% | 82.7% |
| 2429364 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.76 | 64.0 | 4.47e-01 | 91.3% | 88.8% |
| 3390337 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.73 | 64.0 | 4.48e-01 | 95.7% | 92.4% |
| 3401675 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.72 | 64.0 | 4.34e-01 | 98.6% | 86.7% |
| 3965839 | 77.1.1.6 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 | 0.58 | 35.0 | 2.62e-01 | 73.9% | 27.1% |
| 3432928 | 10.12.1.17 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N | 0.58 | 48.0 | 3.19e-01 | 100.0% | 75.4% |
| 3679507 | 10.12.1.17 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N | 0.57 | 48.0 | 3.31e-01 | 100.0% | 78.2% |
| 3345343 | 10.12.1.17 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N | 0.55 | 46.0 | 3.32e-01 | 100.0% | 67.7% |
| 3482921 | 2484.1.1.170 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ZSWIM1-3_RNaseH-like | 0.53 | 39.0 | 3.03e-01 | 79.7% | 71.5% |
D2
medium
residues 54-210_246-288
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12851.14 best | Tet_JBP | 48.9 | 6.30e-13 | 56.0% | 64.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cg8A00 | 3.60.130.30 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › | 0.63 | 59.0 | 5.32e-01 | 99.0% | 77.4% |
| 4z9eA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.54 | 25.0 | 3.65e-01 | 81.5% | 98.8% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 24.0 | 3.09e-01 | 73.0% | 74.5% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 23.0 | 3.12e-01 | 74.0% | 78.2% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.51 | 23.0 | 3.08e-01 | 81.0% | 77.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4302765 | 10.12.1.47 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Tet_JBP | 0.82 | 75.0 | 6.24e-01 | 94.5% | 66.7% |
| 3594800 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.82 | 75.0 | 6.44e-01 | 94.5% | 72.4% |
| 3600503 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.78 | 75.0 | 6.82e-01 | 99.5% | 84.8% |
| 3708500 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.77 | 71.0 | 4.51e-01 | 94.5% | 27.9% |
| 4110857 | 10.12.1.47 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Tet_JBP | 0.77 | 74.0 | 6.70e-01 | 100.0% | 84.3% |
| 1684447 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.64 | 59.0 | 5.33e-01 | 99.0% | 77.2% |
| 3738564 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.63 | 54.0 | 4.96e-01 | 90.0% | 75.3% |
| 4943974 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 29.0 | 3.72e-01 | 87.0% | 88.2% |
| 3926977 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 24.0 | 3.00e-01 | 85.5% | 64.2% |
| 4934212 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.53 | 25.0 | 3.51e-01 | 83.0% | 91.6% |
| 4971398 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.52 | 25.0 | 3.29e-01 | 83.5% | 80.9% |
| 5061342 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.52 | 25.0 | 3.35e-01 | 81.5% | 85.7% |
| 4945893 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.51 | 25.0 | 3.52e-01 | 81.5% | 98.9% |
| 3438216 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.51 | 30.0 | 3.70e-01 | 96.5% | 94.2% |