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JQ823123.1__AFM54747.1__P12024L_27__00027

Bact-Vir

JQ823123.1__AFM54747.1__P12024L_27__00027

Identity

Accession:
JQ823123 ↗
Kingdom:
phage

Quality

95.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Inhavirus› Nonlabens_phage_P12024L

TaxID: 1168479

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-188
PDB
Domain cluster: rep: OP617741.1__UYL04397.1__EPNKCIFM_00095__00076__D4-180
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20691.4 best TAGT 73.0 4.40e-20 100.0% 91.8%
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tbfA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.73 33.0 3.66e-01 78.9% 53.0%
4d9gA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.72 33.0 4.12e-01 89.7% 67.2%
5b1hA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.72 33.0 4.38e-01 75.1% 78.4%
1wkvA03 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 33.0 4.38e-01 75.1% 80.0%
7d73A01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.71 67.0 6.13e-01 100.0% 98.7%
1y7lA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 33.0 4.31e-01 75.1% 78.6%
3tqdA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.70 66.0 5.94e-01 100.0% 92.2%
4kt7A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.70 66.0 6.10e-01 100.0% 87.7%
3ouzA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 32.0 4.60e-01 87.6% 92.0%
2ggoA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.70 66.0 6.30e-01 100.0% 97.1%
2pbzA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 32.0 4.70e-01 91.4% 97.6%
2r7kA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 35.0 4.45e-01 91.4% 81.1%
1vpaA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.69 65.0 6.06e-01 100.0% 89.1%
4qysA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 33.0 4.26e-01 100.0% 82.7%
2yc3A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.66 62.0 5.83e-01 100.0% 89.5%
1fuyB01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 37.0 3.91e-01 100.0% 61.0%
1e0tA01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.65 34.0 4.14e-01 76.8% 76.4%
6ckmA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.63 59.0 5.52e-01 100.0% 89.8%
7oo1A02 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.63 35.0 4.25e-01 78.4% 83.9%
1a3wA01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.62 35.0 3.82e-01 77.3% 65.2%
3e0vB01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.62 34.0 3.66e-01 78.4% 60.9%
1a49A01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.60 35.0 3.63e-01 78.4% 59.7%
4bucA03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.59 32.0 3.81e-01 91.9% 75.0%
3gqvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 36.0 3.58e-01 100.0% 57.9%
2f00A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 28.0 4.04e-01 75.7% 97.7%
3gmsA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 37.0 4.37e-01 100.0% 94.4%
3l4bC01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 36.0 4.35e-01 100.0% 98.3%
2eihA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 37.0 4.15e-01 100.0% 83.9%
7bvaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 30.0 3.96e-01 100.0% 98.9%
3qwbA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 37.0 4.11e-01 100.0% 84.1%
1ep3B02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.56 33.0 4.05e-01 100.0% 91.5%
3pi7A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 36.0 4.03e-01 100.0% 83.0%
2hwyA00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.55 34.0 4.20e-01 100.0% 97.4%
1xmxA01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.55 39.0 4.35e-01 100.0% 93.0%
1a9xA08 3.40.50.1380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain 0.54 30.0 3.78e-01 99.5% 92.5%
1lssA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 35.0 4.04e-01 100.0% 90.2%
4a0sA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 39.0 4.31e-01 100.0% 94.6%
1lsuA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 34.0 3.94e-01 100.0% 89.6%
1pswA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 36.0 4.09e-01 100.0% 95.1%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3704248 7516.1.1.88 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › TAGT 0.93 90.0 7.34e-01 100.0% 71.3%
3600962 7516.1.1.0 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.91 88.0 7.26e-01 100.0% 73.6%
3762127 7516.1.1.88 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › TAGT 0.90 87.0 6.78e-01 100.0% 62.0%
3774583 7516.1.1.88 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › TAGT 0.90 87.0 6.89e-01 100.0% 65.7%
5066229 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.80 76.0 6.13e-01 98.9% 63.7%
5072742 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.78 74.0 6.19e-01 100.0% 68.3%
4048994 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.78 74.0 6.01e-01 100.0% 62.5%
5029019 7516.1.1.0 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.78 74.0 6.79e-01 100.0% 90.6%
5019219 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.78 74.0 6.16e-01 100.0% 66.3%
5061623 7516.1.1.26 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_tranf_2_3 0.78 74.0 5.97e-01 100.0% 62.8%
5030078 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.78 74.0 6.17e-01 100.0% 66.8%
3285625 7516.1.1.56 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_7C 0.77 73.0 6.31e-01 100.0% 75.6%
4988210 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.77 73.0 5.94e-01 100.0% 62.2%
3988034 7516.1.1.102 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2, Glyco_trans_2_3 0.77 73.0 5.79e-01 100.0% 58.9%
5034156 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.77 73.0 5.91e-01 100.0% 64.0%
5075035 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.76 72.0 6.19e-01 100.0% 68.7%
4210088 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.76 71.0 5.84e-01 100.0% 62.5%
4999382 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.75 71.0 6.48e-01 100.0% 83.0%
4967638 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.75 71.0 6.54e-01 100.0% 83.5%
5065520 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.74 71.0 6.50e-01 100.0% 82.6%
5020596 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.74 71.0 6.67e-01 100.0% 88.8%
4997919 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.74 70.0 5.59e-01 100.0% 55.1%
4959775 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.74 70.0 5.76e-01 100.0% 60.6%
3229670 2003.4.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.74 35.0 3.85e-01 100.0% 54.7%
4965921 7516.1.1.1 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase 0.74 69.0 6.07e-01 100.0% 91.7%
5020645 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.74 70.0 5.89e-01 100.0% 65.5%
4946512 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.74 70.0 5.63e-01 100.0% 57.3%
4396900 7516.1.1.24 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.73 69.0 6.17e-01 100.0% 87.2%
4947070 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.73 69.0 6.42e-01 100.0% 85.3%
5054360 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.73 69.0 6.41e-01 100.0% 82.2%
4237386 7516.1.1.5 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD 0.72 65.0 6.50e-01 100.0% 92.6%
4946142 7516.1.1.24 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.72 66.0 6.49e-01 100.0% 91.3%
5003382 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.72 68.0 6.70e-01 100.0% 96.4%
4043513 7516.1.1.24 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.72 68.0 6.09e-01 100.0% 88.6%
4219858 7516.1.1.24 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.71 65.0 6.34e-01 100.0% 89.0%
5035449 7516.1.1.1 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase 0.71 67.0 6.06e-01 100.0% 89.4%
4678489 7516.1.1.5 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD 0.71 65.0 6.37e-01 100.0% 90.0%
4521057 7516.1.1.10 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC 0.71 64.0 6.18e-01 100.0% 85.9%
4393591 7516.1.1.24 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.71 65.0 6.37e-01 100.0% 90.0%
5061037 7516.1.1.23 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF2064 0.70 66.0 6.24e-01 100.0% 85.1%
5043935 7516.1.1.1 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase 0.70 66.0 6.21e-01 100.0% 90.9%
1018901 7516.1.1.5 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD 0.70 66.0 6.10e-01 100.0% 87.7%
4949381 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.70 37.0 4.27e-01 80.5% 69.1%
4678666 7516.1.1.11 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 0.70 65.0 5.84e-01 100.0% 92.8%
3602536 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.69 36.0 4.48e-01 77.3% 80.0%
4958288 7516.1.1.0 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.69 60.0 6.19e-01 100.0% 96.6%
4926974 2003.4.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.69 35.0 4.09e-01 100.0% 67.4%
10290 7516.1.1.5 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD 0.69 65.0 6.06e-01 100.0% 89.1%
4972566 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.68 36.0 4.44e-01 78.9% 79.2%
5058184 7516.1.1.10 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC 0.67 63.0 5.59e-01 100.0% 74.2%
4938785 7516.1.1.24 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.67 63.0 5.87e-01 100.0% 89.8%
4853121 2003.4.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.67 34.0 4.02e-01 100.0% 68.9%
4947512 2003.1.10.10 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › DUF1246 0.66 36.0 4.54e-01 100.0% 87.3%
4388415 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.66 37.0 4.46e-01 80.0% 81.6%
4669952 7516.1.1.0 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.66 62.0 5.74e-01 100.0% 89.3%
4998635 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.65 37.0 4.40e-01 81.6% 80.0%
4312795 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.63 38.0 4.18e-01 85.4% 72.7%
5050006 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.63 37.0 4.24e-01 82.2% 77.1%
4516103 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.62 35.0 4.22e-01 78.4% 82.1%
3500538 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.62 36.0 4.11e-01 80.5% 76.1%
4946219 2003.1.10.35 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › CPSase_L_D2 0.61 36.0 4.44e-01 96.2% 92.2%
3413126 2003.1.10.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.57 34.0 3.66e-01 88.6% 67.5%
4984498 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.55 37.0 4.27e-01 96.8% 94.7%
4977640 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.55 36.0 4.26e-01 96.8% 95.3%
5047918 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.54 36.0 4.19e-01 100.0% 94.6%
5072607 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.54 36.0 4.19e-01 100.0% 95.4%
4009232 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.53 43.0 4.33e-01 85.4% 92.4%
4972112 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.53 35.0 4.08e-01 100.0% 94.6%
4038369 7543.1.1.2 ↗ a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS 0.52 31.0 3.55e-01 100.0% 79.3%
1874320 7512.1.1.20 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › EryCIII-like_C 0.52 39.0 4.01e-01 93.5% 81.5%
3957458 7512.1.1.32 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.50 39.0 3.80e-01 90.8% 72.1%
3963662 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.50 40.0 4.32e-01 100.0% 99.4%
D2 medium residues 207-243
PDB
Domain cluster: representative
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4lq0A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.71 55.0 3.80e-01 100.0% 24.5%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.70 54.0 4.42e-01 97.3% 44.2%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.69 52.0 3.87e-01 100.0% 31.1%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.68 53.0 4.52e-01 97.3% 53.5%
2greA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.67 50.0 3.13e-01 100.0% 14.0%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 51.0 4.26e-01 94.6% 49.3%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.65 49.0 3.83e-01 100.0% 36.1%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.65 49.0 3.51e-01 100.0% 25.6%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.64 49.0 4.18e-01 97.3% 50.0%
1qjvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.64 43.0 2.47e-01 70.3% 33.6%
8dkrB01 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.63 43.0 2.65e-01 75.7% 10.9%
7xhzA01 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.62 47.0 3.45e-01 100.0% 28.5%
1dctA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 41.0 2.67e-01 73.0% 13.9%
2mkyA00 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.62 48.0 4.37e-01 97.3% 72.4%
7xinA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 48.0 3.64e-01 100.0% 38.5%
2af6A01 3.30.70.3180 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 48.0 3.44e-01 97.3% 97.7%
5xukA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.60 52.0 3.67e-01 100.0% 42.6%
5mp7A01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 45.0 2.99e-01 86.5% 58.0%
2qyvA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.60 45.0 2.83e-01 100.0% 13.7%
2z2mD01 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.60 43.0 3.83e-01 81.1% 62.7%
2ab5A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 48.0 3.44e-01 100.0% 28.4%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 39.0 2.88e-01 83.8% 23.3%
1ewqA04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.60 48.0 3.44e-01 100.0% 30.1%
3u5eU00 3.30.1360.210 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.59 46.0 3.51e-01 91.9% 44.0%
1xttB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 41.0 2.57e-01 73.0% 16.3%
2p92A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.59 47.0 3.68e-01 100.0% 41.1%
1vx7X00 3.30.1360.210 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.59 44.0 3.43e-01 91.9% 96.9%
4jn3A01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.58 47.0 3.01e-01 97.3% 56.6%
1u0tB01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.58 48.0 3.31e-01 97.3% 61.9%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 3.25e-01 94.6% 47.8%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 44.0 3.49e-01 100.0% 38.8%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.57 43.0 3.69e-01 97.3% 66.2%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.33e-01 81.1% 51.2%
2o8bA04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.57 44.0 3.66e-01 100.0% 62.7%
2z3gB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.57 43.0 3.12e-01 89.2% 92.9%
3ou2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 42.0 2.81e-01 100.0% 83.8%
4nzrM01 3.30.1370.200 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 43.0 3.42e-01 86.5% 56.0%
3s93A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.56 40.0 3.36e-01 86.5% 65.0%
2bddA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.56 41.0 2.98e-01 89.2% 65.4%
3e07A00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.56 43.0 3.46e-01 97.3% 97.8%
1c0gA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.56 48.0 3.63e-01 100.0% 75.0%
1xa3A01 3.40.50.10540 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.56 38.0 2.33e-01 75.7% 10.4%
1hbxA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.55 41.0 3.41e-01 83.8% 46.5%
1v9kA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.55 42.0 2.68e-01 91.9% 20.3%
3g9kF01 3.60.20.40 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit 0.55 39.0 2.58e-01 75.7% 23.3%
6qdws00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.55 41.0 3.02e-01 83.8% 55.0%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 3.76e-01 100.0% 53.3%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 2.92e-01 97.3% 30.8%
2w00A02 3.90.640.50 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.55 46.0 3.77e-01 100.0% 83.6%
3uoxB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 2.76e-01 100.0% 69.2%
1ultB01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.55 42.0 2.48e-01 94.6% 24.5%
2wz1B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.54 41.0 2.74e-01 100.0% 23.5%
6ketA01 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.54 37.0 2.22e-01 78.4% 33.0%
3g87A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.54 41.0 3.63e-01 100.0% 56.7%
5yk4A04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.54 44.0 3.08e-01 100.0% 27.2%
4izzB03 1.10.10.1670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain 0.54 41.0 3.09e-01 94.6% 54.8%
1i07A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 43.0 3.72e-01 89.2% 66.1%
1h2iA01 3.30.390.80 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 0.54 39.0 2.83e-01 94.6% 36.5%
3foeA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.53 36.0 3.14e-01 70.3% 55.1%
1cp9A01 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.53 42.0 2.92e-01 94.6% 79.5%
3vkgA07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 42.0 2.46e-01 97.3% 87.6%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.53 45.0 3.09e-01 100.0% 71.0%
5ly3A02 3.30.420.570 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.53 43.0 2.73e-01 100.0% 39.7%
4yzrA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.53 42.0 2.44e-01 100.0% 15.2%
2askA00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.53 37.0 2.73e-01 73.0% 61.4%
3g7qA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 46.0 2.86e-01 100.0% 45.1%
1vwxg01 6.20.370.70 Special › Other non-globular › Rhinovirus 14, subunit 4 › 0.52 42.0 4.29e-01 100.0% 97.3%
2qetA02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.52 40.0 3.26e-01 91.9% 44.4%
4k7cA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 42.0 2.49e-01 100.0% 41.9%
2uvaG11 6.10.60.10 Special › Helix non-globular › Hydrophobic Seed Protein › 0.52 40.0 3.64e-01 89.2% 74.5%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.17e-01 97.3% 54.3%
6qlyA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 40.0 3.22e-01 89.2% 69.9%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 38.0 2.42e-01 86.5% 18.8%
2c4kA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 42.0 2.82e-01 97.3% 32.3%
1o75A02 2.30.30.470 Mainly Beta › Roll › SH3 type barrels. › Penicillin-binding protein Tp47, domain B 0.51 38.0 2.87e-01 94.6% 88.4%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3171078 109.4.1.1932 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NopRA1, PF26140 0.71 48.0 2.53e-01 70.3% 2.0%
3714022 304.24.1.3 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.69 53.0 4.74e-01 97.3% 56.7%
None — 0.68 56.0 3.27e-01 97.3% 31.6%
3739666 247.1.1.38 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.68 50.0 3.90e-01 86.5% 58.9%
4281574 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.67 44.0 3.42e-01 73.0% 31.2%
3582282 109.2.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Trehalase 0.66 47.0 2.62e-01 78.4% 5.3%
4215842 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.65 53.0 3.45e-01 100.0% 19.5%
5053763 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 54.0 4.16e-01 97.3% 53.3%
3924514 109.4.1.83 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf 0.65 45.0 2.68e-01 75.7% 11.0%
3222449 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.64 52.0 3.13e-01 100.0% 36.8%
4975223 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 41.0 2.37e-01 83.8% 6.5%
3224463 109.27.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.63 51.0 3.51e-01 100.0% 25.8%
3592627 601.23.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.63 53.0 3.27e-01 100.0% 15.8%
3726808 4163.1.1.1 ↗ alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.63 43.0 2.79e-01 70.3% 15.0%
5073006 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.63 50.0 3.34e-01 91.9% 76.9%
174910 1.1.7.22 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_M42 0.62 44.0 3.88e-01 100.0% 46.4%
4411000 139.2.1.6 ↗ few secondary structure elements › Multiheme cytochromes › Di-heme elbow motif › Di-heme elbow motif › Cytochrome_C554 0.62 48.0 3.04e-01 89.2% 32.6%
3794595 109.27.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.62 45.0 2.70e-01 78.4% 10.5%
3633123 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 44.0 3.18e-01 75.7% 27.8%
3364027 101.1.2.245 ↗ alpha arrays › HTH › HTH › winged helix domain › PORR 0.62 48.0 3.06e-01 94.6% 21.4%
134624 842.1.1.1 ↗ a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 0.61 49.0 3.05e-01 97.3% 98.4%
3282985 101.1.2.508 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25872 0.61 49.0 3.86e-01 94.6% 57.6%
3574593 109.4.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.61 44.0 2.74e-01 75.7% 14.6%
5050094 2004.1.1.97 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.61 48.0 3.14e-01 89.2% 52.9%
3434200 387.1.5.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.61 45.0 4.51e-01 89.2% 95.0%
3575990 5067.1.1.3 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched 0.61 43.0 2.54e-01 75.7% 9.6%
3727895 872.4.1.0 ↗ a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like 0.61 46.0 4.18e-01 89.2% 63.6%
3683227 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.60 40.0 2.53e-01 83.8% 11.2%
4013126 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.60 50.0 3.89e-01 97.3% 52.2%
3973365 205.1.1.22 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.60 47.0 3.65e-01 97.3% 37.9%
5060078 2484.1.1.291 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_V 0.60 47.0 2.62e-01 100.0% 6.0%
5069873 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 46.0 3.75e-01 94.6% 56.5%
4652858 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 47.0 2.93e-01 94.6% 19.6%
3482761 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 39.0 2.29e-01 83.8% 6.2%
4200968 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.60 42.0 3.27e-01 73.0% 32.9%
4274656 263.1.1.0 ↗ a+b three layers › SRF-like › SRF-like › SRF-like 0.60 44.0 2.99e-01 81.1% 22.9%
3585702 101.1.2.90 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.59 45.0 3.63e-01 94.6% 57.6%
4887239 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.58 39.0 2.69e-01 89.2% 19.5%
3981752 829.1.1.1 ↗ a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB 0.57 43.0 3.02e-01 83.8% 56.9%
4945161 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.57 44.0 2.86e-01 86.5% 36.3%
3783976 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 40.0 3.17e-01 75.7% 77.8%
3687407 101.11.1.0 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.57 42.0 3.47e-01 81.1% 74.3%
3735563 101.1.2.267 ↗ alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.57 46.0 3.18e-01 97.3% 31.3%
None — 0.57 49.0 2.62e-01 100.0% 5.1%
3958549 2006.1.2.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.57 42.0 2.82e-01 83.8% 23.7%
4012100 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 43.0 3.08e-01 97.3% 33.6%
3315108 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.56 44.0 3.31e-01 94.6% 47.3%
4972761 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 46.0 2.86e-01 100.0% 92.0%
3974474 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.56 40.0 3.14e-01 78.4% 58.9%
3712185 152.1.1.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 0.56 42.0 3.37e-01 83.8% 50.7%
3301960 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.56 48.0 2.95e-01 100.0% 37.3%
4033043 616.1.1.41 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Terminase_4 0.56 40.0 3.11e-01 75.7% 50.0%
3292448 4964.1.1.2 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.56 39.0 2.50e-01 75.7% 19.5%
4121534 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.55 42.0 2.54e-01 91.9% 10.9%
4086588 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.55 38.0 2.59e-01 78.4% 28.6%
3933404 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.55 42.0 2.85e-01 86.5% 22.0%
5006536 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.55 41.0 3.31e-01 94.6% 53.3%
3348286 323.1.1.7 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase 0.55 43.0 3.02e-01 100.0% 71.3%
4945998 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 3.71e-01 91.9% 60.0%
3487912 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 41.0 3.15e-01 94.6% 48.2%
4279139 3819.2.1.1 ↗ alpha complex topology › CRISPR-associated endonuclease Cas9 alpha-helical lobe › F. novicida CRISPR-associated endonuclease Cas9 alpha-helical lobe › F. novicida CRISPR-associated endonuclease Cas9 alpha-helical lobe › Csx12 0.55 45.0 2.45e-01 91.9% 39.5%
3169604 2004.1.1.495 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TRAPPC10_1st 0.55 40.0 2.52e-01 78.4% 23.9%
4025072 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.55 38.0 2.81e-01 75.7% 67.8%
3178207 101.1.2.774 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30201 0.55 45.0 3.01e-01 94.6% 29.1%
3636295 101.35.1.30 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF29051 0.54 37.0 2.69e-01 73.0% 62.3%
3509891 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.54 39.0 2.37e-01 97.3% 9.7%
3926333 5054.1.1.59 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.54 43.0 2.44e-01 89.2% 9.6%
4991918 632.18.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 0.54 42.0 3.15e-01 91.9% 86.7%
4225107 213.1.1.10 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Leu_Phe_trans 0.54 44.0 2.90e-01 100.0% 92.6%
3834208 2004.5.1.3 ↗ a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.54 43.0 2.71e-01 100.0% 74.6%
4240628 4964.1.1.2 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.53 41.0 2.64e-01 91.9% 65.0%
3182948 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.53 41.0 3.63e-01 94.6% 54.0%
3627917 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.53 41.0 2.77e-01 100.0% 32.2%
3598683 109.20.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Coatomer subunit alpha C-terminal domain › Coatomer subunit alpha C-terminal domain 0.53 42.0 2.65e-01 94.6% 20.8%
3276386 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.61e-01 100.0% 54.3%
4962431 2003.1.3.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › CoA_transf_3 0.52 38.0 2.22e-01 78.4% 7.8%
3574069 604.12.1.62 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DuoxA 0.52 45.0 3.16e-01 100.0% 72.0%
4646939 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.52 42.0 2.60e-01 97.3% 27.3%
3517383 109.4.1.587 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mon2_C 0.52 43.0 2.31e-01 100.0% 8.2%
4025070 101.1.2.407 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.51 37.0 2.88e-01 97.3% 44.2%
3197266 164.1.1.0 ↗ alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II 0.50 38.0 3.13e-01 83.8% 80.0%