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JQ867099.1__AFM54812.1__P2559S_34__00034
Bact-VirJQ867099.1__AFM54812.1__P2559S_34__00034
Identity
- Accession:
- JQ867099 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-114
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lqzA00 | 2.40.128.570 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 | 0.82 | 74.0 | 6.11e-01 | 97.4% | 98.5% |
| 2jmbA00 | 2.40.128.290 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 | 0.75 | 67.0 | 6.70e-01 | 98.7% | 96.2% |
| 4hwmA00 | 2.40.128.500 | Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein | 0.74 | 66.0 | 5.75e-01 | 98.7% | 73.5% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.74 | 59.0 | 5.93e-01 | 87.0% | 100.0% |
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.73 | 66.0 | 6.31e-01 | 100.0% | 94.4% |
| 2o62A02 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.70 | 62.0 | 5.19e-01 | 100.0% | 97.1% |
| 2kuqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 47.0 | 3.76e-01 | 71.4% | 81.0% |
| 3n6rA03 | 3.30.700.30 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.66 | 57.0 | 4.83e-01 | 98.7% | 77.4% |
| 2fmlA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.65 | 50.0 | 3.91e-01 | 83.1% | 95.7% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.60 | 50.0 | 4.87e-01 | 96.1% | 96.6% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.59 | 52.0 | 5.19e-01 | 97.4% | 96.2% |
| 2lioA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 48.0 | 3.98e-01 | 90.9% | 50.0% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 50.0 | 3.39e-01 | 94.8% | 89.9% |
| 2wkkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 48.0 | 3.93e-01 | 93.5% | 74.0% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 51.0 | 4.29e-01 | 100.0% | 80.3% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 43.0 | 4.21e-01 | 81.8% | 89.7% |
| 2elbA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 47.0 | 4.31e-01 | 100.0% | 68.6% |
| 2cofA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 40.0 | 3.62e-01 | 72.7% | 78.5% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.57 | 47.0 | 3.67e-01 | 93.5% | 66.1% |
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.57 | 47.0 | 2.76e-01 | 92.2% | 18.5% |
| 6jwfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 47.0 | 3.05e-01 | 94.8% | 91.0% |
| 2ojhA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 46.0 | 3.19e-01 | 92.2% | 88.1% |
| 3u9sE04 | 3.30.700.40 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.56 | 49.0 | 4.20e-01 | 98.7% | 75.2% |
| 1nr0A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 47.0 | 3.19e-01 | 96.1% | 90.4% |
| 4dixA02 | 2.30.29.140 | Mainly Beta › Roll › PH-domain like › | 0.55 | 44.0 | 3.84e-01 | 90.9% | 77.6% |
| 2h0bC00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 44.0 | 3.48e-01 | 96.1% | 72.1% |
| 2wsuB02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 48.0 | 3.91e-01 | 100.0% | 90.3% |
| 2xp1A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 47.0 | 4.38e-01 | 97.4% | 84.2% |
| 3pveA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.48e-01 | 96.1% | 86.9% |
| 2b5lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.84e-01 | 93.5% | 93.2% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 44.0 | 3.84e-01 | 94.8% | 93.3% |
| 6pxcA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 43.0 | 3.97e-01 | 93.5% | 88.5% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 44.0 | 3.47e-01 | 100.0% | 80.3% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.52 | 44.0 | 4.00e-01 | 96.1% | 92.4% |
| 3k2zA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.52 | 40.0 | 3.51e-01 | 84.4% | 84.9% |
| 2r16A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 3.37e-01 | 96.1% | 70.9% |
| 3zx7A02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 42.0 | 3.63e-01 | 97.4% | 94.9% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 36.0 | 2.99e-01 | 76.6% | 93.3% |
| 7b2sA01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.50 | 43.0 | 3.52e-01 | 100.0% | 64.5% |
| 1jheA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.50 | 38.0 | 3.28e-01 | 81.8% | 82.3% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5034888 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.91 | 86.0 | 7.79e-01 | 100.0% | 96.0% |
| 3600529 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.84 | 75.0 | 6.67e-01 | 94.8% | 99.0% |
| 4034291 | 9.19.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › hypothetical protein SAV1798 › hypothetical protein SAV1798 › DUF4909 | 0.84 | 74.0 | 6.10e-01 | 94.8% | 97.7% |
| 3991735 | 9.1.1.49 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 | 0.84 | 76.0 | 6.59e-01 | 98.7% | 98.3% |
| 3630385 | 9.1.1.49 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 | 0.83 | 76.0 | 6.55e-01 | 98.7% | 94.8% |
| 3511507 | 9.1.1.49 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 | 0.82 | 75.0 | 6.40e-01 | 98.7% | 100.0% |
| 3606549 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.81 | 71.0 | 6.24e-01 | 93.5% | 98.2% |
| 3974426 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.80 | 73.0 | 7.11e-01 | 100.0% | 100.0% |
| 4940664 | 9.16.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 | 0.78 | 69.0 | 6.71e-01 | 98.7% | 97.6% |
| 3589829 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.75 | 67.0 | 6.05e-01 | 98.7% | 94.3% |
| 3974425 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.73 | 66.0 | 6.14e-01 | 100.0% | 96.8% |
| 3961274 | 3794.1.1.2 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCC_alpha_BT | 0.72 | 64.0 | 5.39e-01 | 98.7% | 81.5% |
| 5055306 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 53.0 | 3.71e-01 | 80.5% | 42.9% |
| 3282190 | 3794.1.1.2 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCC_alpha_BT | 0.69 | 62.0 | 5.26e-01 | 98.7% | 83.2% |
| 3265885 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.69 | 60.0 | 4.96e-01 | 98.7% | 87.1% |
| 3101373 | 3794.1.1.1 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › PCC_BT | 0.67 | 56.0 | 4.64e-01 | 93.5% | 73.8% |
| 144577 | 331.3.1.22 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START_2 | 0.59 | 48.0 | 4.06e-01 | 90.9% | 53.1% |
| 3788776 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.59 | 47.0 | 3.10e-01 | 87.0% | 43.9% |
| 3469478 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.58 | 41.0 | 2.97e-01 | 75.3% | 38.7% |
| 5071633 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.57 | 49.0 | 3.42e-01 | 92.2% | 84.7% |
| 3212893 | 5.1.3.57 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › IKI3 | 0.57 | 49.0 | 3.21e-01 | 97.4% | 42.8% |
| 3187236 | 5.1.4.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N | 0.57 | 48.0 | 3.14e-01 | 92.2% | 86.0% |
| 4023075 | 5.1.4.383 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › VPS11_N | 0.56 | 45.0 | 3.04e-01 | 88.3% | 27.9% |
| 3625623 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.56 | 48.0 | 3.86e-01 | 96.1% | 68.0% |
| 3418340 | 5.1.5.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N | 0.55 | 46.0 | 3.10e-01 | 94.8% | 86.4% |
| 3232545 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.55 | 42.0 | 3.12e-01 | 85.7% | 43.6% |
| 3508282 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.53 | 45.0 | 2.88e-01 | 93.5% | 72.6% |
| 4954638 | 241.9.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF5655 | 0.53 | 46.0 | 4.10e-01 | 100.0% | 82.5% |
| 4335502 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.52 | 39.0 | 3.77e-01 | 88.3% | 68.9% |
| 5016260 | 56.2.1.1 ↗ | beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT | 0.52 | 35.0 | 3.89e-01 | 80.5% | 89.8% |
| 1169937 | 71.1.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › MucB_RseB | 0.52 | 44.0 | 3.42e-01 | 100.0% | 77.8% |
| 3733997 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.52 | 43.0 | 3.82e-01 | 100.0% | 94.4% |
| 3889312 | 10.1.1.1 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 | 0.51 | 44.0 | 3.44e-01 | 98.7% | 94.9% |
| 3798360 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.51 | 43.0 | 3.98e-01 | 100.0% | 100.0% |
| 3257384 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.51 | 44.0 | 3.95e-01 | 100.0% | 90.0% |