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JQ867100.1__AFM54865.1__P12026_19__00019
Bact-VirJQ867100.1__AFM54865.1__P12026_19__00019
Identity
- Accession:
- JQ867100 ↗
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 87-147
Domain cluster:
rep: OM471789.1__UMM62452.1__X__00001__D31-84
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3frnA02 | 3.90.1210.10 | Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | 0.60 | 50.0 | 4.89e-01 | 93.4% | 91.2% |
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.59 | 38.0 | 4.22e-01 | 90.2% | 83.3% |
| 3g8rA02 | 3.90.1210.10 | Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | 0.59 | 48.0 | 4.43e-01 | 93.4% | 74.1% |
| 1yw6B00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 47.0 | 3.12e-01 | 100.0% | 22.2% |
| 1k8mA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 48.0 | 4.33e-01 | 100.0% | 89.7% |
| 2hoeA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 40.0 | 3.17e-01 | 91.8% | 90.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083817 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.62 | 55.0 | 5.44e-01 | 98.4% | 100.0% |
| 4164731 | 325.2.1.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Succinylglutamate desuccinylase / Aspartoacylase C-terminal domain › Succinylglutamate desuccinylase / Aspartoacylase C-terminal domain › AstE_AspA | 0.56 | 47.0 | 4.43e-01 | 96.7% | 86.7% |
| 4048695 | 325.2.1.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Succinylglutamate desuccinylase / Aspartoacylase C-terminal domain › Succinylglutamate desuccinylase / Aspartoacylase C-terminal domain › AstE_AspA | 0.53 | 44.0 | 4.16e-01 | 100.0% | 83.5% |
| 3571564 | 2.1.1.146 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1-like | 0.52 | 39.0 | 3.92e-01 | 83.6% | 95.4% |
| 3964485 | 325.1.7.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Biotin_lipoyl | 0.52 | 44.0 | 4.26e-01 | 100.0% | 95.7% |