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JQ867100.1__AFM54874.1__P12026_28__00028

Bact-Vir

JQ867100.1__AFM54874.1__P12026_28__00028

Identity

Accession:
JQ867100 ↗
Kingdom:
phage

Quality

82.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Marinomonas_phage_P12026

TaxID: 1176423

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 25-102
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mhsA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 34.0 2.92e-01 73.1% 41.7%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4375217 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.74 41.0 4.06e-01 75.6% 52.5%
4937892 101.1.3.32 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › RHH_1 0.71 47.0 4.34e-01 78.2% 53.0%
4644045 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.70 41.0 3.68e-01 79.5% 42.9%
5076430 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.63 44.0 4.82e-01 100.0% 87.7%
3635653 109.4.1.2129 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UME, M-HEAT_ATR 0.57 39.0 2.34e-01 70.5% 13.8%
4928595 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.56 52.0 4.63e-01 98.7% 86.7%