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JQ965645.1AFL46948.1SSU5_021__00021

Bact-Vir

JQ965645.1__AFL46948.1__SSU5_021__00021

Identity

Accession:: JQ965645 ↗
Kingdom:: phage

Quality

76.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmonella_phage_SSU5

TaxID: 1177632

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 459-593

PDB

Domain cluster: rep: NC_007149.1__YP_249596.1__VVP4_p28__00028__D493-632

D2 medium residues 2-126

PDB

Domain cluster: rep: OM868082.1__UPT53432.1__X__00062__D7-97

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5zl6A01	2.40.37.10	Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1	0.64	44.0	4.15e-01	70.4%	71.5%
2dmwA01	3.30.450.50	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain	0.52	33.0	3.46e-01	88.8%	68.1%
3zugB02	2.40.30.30	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like	0.52	41.0	3.98e-01	96.8%	75.4%

D3 medium residues 127-221

PDB

Domain cluster: representative

D4 medium residues 257-329

PDB

D5 medium residues 330-431

PDB

D6 medium residues 674-776

PDB

Domain cluster: rep: HM114315.1__ADJ19563.1__Acj133p248__00248__D230-307

D7 medium residues 777-895

PDB

Domain cluster: rep: KJ002054.2__AHJ10575.1__Spp001_67__00067__D760-856

D8 medium residues 926-981

PDB

Domain cluster: rep: LN881737.1__CUL03539.1__X__00001__D148-210

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF21446.4 best	Gp34_trimer	81.4	9.70e-23	80.4%	36.5%

D9 medium residues 1068-1149

PDB

Domain cluster: rep: GQ357916.1__ACV50309.1__X__00050__D367-426

D10 medium residues 1166-1259

PDB

Domain cluster: rep: IMGVR_UViG_3300010235_000004-3300010235-Ga0136247_100002931__D99-185

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF13884.12 best	Peptidase_S74	29.1	1.30e-06	50.0%	86.2%