←Back to structures
JQ965645.1__AFL47001.1__SSU5_074__00074
Bact-VirJQ965645.1__AFL47001.1__SSU5_074__00074
Identity
- Accession:
- JQ965645 ↗
- Kingdom:
- phage
Quality
75.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-53
Domain cluster:
representative
CATH (91)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 71.0 | 5.57e-01 | 100.0% | 57.3% |
| 5optn00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 70.0 | 5.55e-01 | 100.0% | 64.5% |
| 5xyiK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 69.0 | 5.57e-01 | 100.0% | 60.0% |
| 4bpe700 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 65.0 | 5.13e-01 | 100.0% | 52.5% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 67.0 | 5.09e-01 | 100.0% | 48.1% |
| 4qjvA03 | 3.30.70.3110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 56.0 | 5.11e-01 | 100.0% | 62.9% |
| 2mh2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 62.0 | 5.49e-01 | 93.5% | 78.1% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.70 | 59.0 | 4.81e-01 | 100.0% | 53.2% |
| 1qbjC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.33e-01 | 95.7% | 69.7% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 4.83e-01 | 100.0% | 53.8% |
| 4a6dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 62.0 | 4.87e-01 | 100.0% | 57.4% |
| 2d1hB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 59.0 | 4.65e-01 | 100.0% | 49.0% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 58.0 | 4.84e-01 | 100.0% | 66.7% |
| 3f6oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 58.0 | 4.68e-01 | 100.0% | 54.9% |
| 1q36A01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.66 | 56.0 | 3.60e-01 | 100.0% | 21.0% |
| 1ucrB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 58.0 | 4.95e-01 | 97.8% | 65.3% |
| 4efjA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.66 | 53.0 | 3.80e-01 | 100.0% | 30.0% |
| 1af5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.66 | 51.0 | 3.83e-01 | 100.0% | 32.5% |
| 4ad9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 55.0 | 4.58e-01 | 95.7% | 65.5% |
| 2qvoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 56.0 | 4.63e-01 | 100.0% | 60.9% |
| 2wb6A00 | 3.90.1150.90 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.66 | 56.0 | 4.20e-01 | 95.7% | 79.8% |
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 56.0 | 4.60e-01 | 100.0% | 62.2% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 56.0 | 4.53e-01 | 100.0% | 54.8% |
| 4b8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 56.0 | 4.00e-01 | 100.0% | 35.0% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 56.0 | 4.40e-01 | 100.0% | 49.5% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 4.68e-01 | 93.5% | 76.8% |
| 5iceA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 57.0 | 4.40e-01 | 100.0% | 56.4% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 4.61e-01 | 100.0% | 67.1% |
| 2vxzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 4.80e-01 | 95.7% | 71.2% |
| 3l09A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 54.0 | 4.53e-01 | 100.0% | 67.9% |
| 4annA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.64 | 55.0 | 3.76e-01 | 100.0% | 28.4% |
| 2l01A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 53.0 | 4.51e-01 | 95.7% | 62.3% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 54.0 | 4.48e-01 | 100.0% | 58.3% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 4.31e-01 | 100.0% | 59.8% |
| 1ejdA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.63 | 50.0 | 3.25e-01 | 100.0% | 19.8% |
| 2o0bA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.62 | 51.0 | 3.42e-01 | 100.0% | 21.5% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 54.0 | 3.85e-01 | 100.0% | 35.0% |
| 2hr3D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 4.65e-01 | 93.5% | 72.6% |
| 3d89A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.61 | 49.0 | 3.72e-01 | 100.0% | 89.0% |
| 4asnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 51.0 | 4.24e-01 | 100.0% | 61.1% |
| 4gcvC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 52.0 | 3.75e-01 | 100.0% | 35.5% |
| 1wr8A02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.61 | 47.0 | 4.16e-01 | 93.5% | 58.0% |
| 1wqsA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 46.0 | 4.13e-01 | 100.0% | 57.1% |
| 2yvwA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.60 | 47.0 | 3.23e-01 | 100.0% | 21.8% |
| 3pqkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 51.0 | 4.08e-01 | 100.0% | 51.5% |
| 1lfpA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.60 | 49.0 | 4.22e-01 | 100.0% | 57.5% |
| 2y23A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 51.0 | 4.02e-01 | 100.0% | 46.2% |
| 1sd4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 48.0 | 4.42e-01 | 93.5% | 79.7% |
| 3qphA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 48.0 | 3.92e-01 | 100.0% | 46.4% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 49.0 | 4.30e-01 | 100.0% | 82.1% |
| 7m0oA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.60 | 50.0 | 3.40e-01 | 100.0% | 25.0% |
| 3pcoB04 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.59 | 51.0 | 4.39e-01 | 100.0% | 64.0% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.59 | 44.0 | 4.00e-01 | 100.0% | 56.5% |
| 5gt8D02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.59 | 51.0 | 3.71e-01 | 100.0% | 36.1% |
| 1ejcA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.59 | 51.0 | 3.37e-01 | 100.0% | 23.1% |
| 1kgdA02 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.59 | 49.0 | 4.58e-01 | 100.0% | 85.0% |
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.59 | 43.0 | 3.92e-01 | 91.3% | 56.7% |
| 2gqcA01 | 3.30.70.2080 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 46.0 | 4.36e-01 | 95.7% | 73.2% |
| 3df8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 3.82e-01 | 100.0% | 48.6% |
| 3cuqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 45.0 | 3.90e-01 | 93.5% | 69.1% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.58 | 49.0 | 3.98e-01 | 100.0% | 58.3% |
| 7k98E03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.58 | 48.0 | 4.26e-01 | 95.7% | 67.6% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 48.0 | 3.85e-01 | 93.5% | 49.5% |
| 1usmA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.58 | 49.0 | 4.26e-01 | 100.0% | 72.7% |
| 2zzzA02 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.57 | 45.0 | 4.32e-01 | 97.8% | 90.0% |
| 3cuqC01 | 1.10.10.570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" | 0.57 | 49.0 | 3.92e-01 | 100.0% | 55.1% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.57 | 45.0 | 4.03e-01 | 100.0% | 81.3% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.57 | 46.0 | 4.07e-01 | 97.8% | 98.7% |
| 1u5tA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 44.0 | 3.90e-01 | 93.5% | 66.7% |
| 2c5sA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.57 | 49.0 | 3.36e-01 | 97.8% | 53.3% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.56 | 47.0 | 3.75e-01 | 100.0% | 61.4% |
| 2wv3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 3.77e-01 | 100.0% | 51.0% |
| 2wa0A02 | 1.10.10.1210 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH2 motif | 0.55 | 46.0 | 3.58e-01 | 100.0% | 59.3% |
| 2yilA02 | 3.30.30.180 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.55 | 44.0 | 4.33e-01 | 97.8% | 84.3% |
| 2cxiA03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.55 | 46.0 | 4.14e-01 | 100.0% | 70.0% |
| 4c9yA00 | 1.10.10.1890 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like | 0.55 | 43.0 | 3.31e-01 | 93.5% | 38.2% |
| 4mo0A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.55 | 44.0 | 3.70e-01 | 91.3% | 51.9% |
| 1bqnA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.55 | 48.0 | 3.83e-01 | 100.0% | 51.1% |
| 3f8kA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 47.0 | 3.48e-01 | 100.0% | 55.0% |
| 1dcoA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.55 | 42.0 | 3.56e-01 | 100.0% | 65.7% |
| 3c9gA01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.55 | 42.0 | 3.24e-01 | 100.0% | 34.1% |
| 1xviA02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.55 | 44.0 | 3.60e-01 | 95.7% | 94.7% |
| 4hkqA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 47.0 | 3.31e-01 | 100.0% | 39.6% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 46.0 | 3.54e-01 | 100.0% | 42.6% |
| 1x9zA02 | 3.30.1370.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain | 0.53 | 43.0 | 3.54e-01 | 100.0% | 48.3% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 46.0 | 4.03e-01 | 100.0% | 65.7% |
| 2dgtA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 43.0 | 3.77e-01 | 100.0% | 58.9% |
| 2j0wA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 44.0 | 3.87e-01 | 100.0% | 65.3% |
| 4dezA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.52 | 43.0 | 3.38e-01 | 93.5% | 44.4% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 45.0 | 3.92e-01 | 100.0% | 64.0% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.43e-01 | 100.0% | 52.8% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3928546 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.81 | 73.0 | 5.62e-01 | 100.0% | 55.0% |
| 2106037 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.79 | 69.0 | 5.57e-01 | 100.0% | 60.0% |
| 4862320 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.79 | 69.0 | 5.43e-01 | 100.0% | 60.4% |
| 3099741 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.78 | 67.0 | 5.28e-01 | 100.0% | 59.6% |
| 5072613 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 65.0 | 6.09e-01 | 100.0% | 80.0% |
| 3877589 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.75 | 62.0 | 5.74e-01 | 93.5% | 71.7% |
| 1432936 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.75 | 64.0 | 5.01e-01 | 100.0% | 51.0% |
| 2697269 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.74 | 67.0 | 4.92e-01 | 100.0% | 43.9% |
| 2831815 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.73 | 61.0 | 5.20e-01 | 100.0% | 65.4% |
| 5021801 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 65.0 | 5.49e-01 | 100.0% | 72.0% |
| 4939103 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.72 | 63.0 | 5.31e-01 | 97.8% | 64.0% |
| 5055446 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 62.0 | 5.45e-01 | 100.0% | 68.6% |
| 4978565 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 61.0 | 5.28e-01 | 95.7% | 67.1% |
| 3595128 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.71 | 58.0 | 5.25e-01 | 97.8% | 66.2% |
| 4967809 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.71 | 62.0 | 5.42e-01 | 100.0% | 74.3% |
| 5579 | 306.8.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › TM1457-like › TM1457-like › Peptidase_Prp | 0.70 | 59.0 | 4.81e-01 | 100.0% | 53.2% |
| 4955274 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.70 | 59.0 | 5.48e-01 | 95.7% | 78.3% |
| 4934550 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 61.0 | 3.83e-01 | 100.0% | 72.5% |
| 5011180 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 60.0 | 5.37e-01 | 100.0% | 76.5% |
| 3949310 | 101.1.2.87 ↗ | alpha arrays › HTH › HTH › winged helix domain › PaaX | 0.70 | 61.0 | 4.51e-01 | 100.0% | 45.8% |
| 5027895 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 59.0 | 5.16e-01 | 97.8% | 70.0% |
| 3808247 | 101.1.2.164 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 | 0.69 | 60.0 | 5.41e-01 | 100.0% | 72.3% |
| 3958894 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 60.0 | 4.94e-01 | 100.0% | 62.4% |
| 5004095 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.69 | 59.0 | 4.88e-01 | 100.0% | 57.6% |
| 5031012 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 59.0 | 4.58e-01 | 100.0% | 52.4% |
| 4948576 | 101.1.2.37 ↗ | alpha arrays › HTH › HTH › winged helix domain › E2F_TDP | 0.68 | 60.0 | 5.37e-01 | 100.0% | 81.5% |
| 4507561 | 3012.1.1.9 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › SecD_1st | 0.68 | 53.0 | 3.69e-01 | 100.0% | 25.8% |
| 4942252 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.67 | 57.0 | 4.93e-01 | 100.0% | 65.3% |
| 4456406 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.67 | 58.0 | 4.61e-01 | 100.0% | 57.9% |
| 5053790 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.67 | 57.0 | 4.56e-01 | 100.0% | 58.9% |
| 4360928 | 101.1.2.39 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA | 0.67 | 56.0 | 5.00e-01 | 100.0% | 72.9% |
| 4940878 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 56.0 | 3.72e-01 | 97.8% | 25.8% |
| 5016878 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 56.0 | 4.78e-01 | 100.0% | 65.0% |
| 4941751 | 101.1.2.650 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7343 | 0.67 | 56.0 | 4.87e-01 | 100.0% | 65.3% |
| 5003316 | 101.1.2.650 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7343 | 0.66 | 56.0 | 4.44e-01 | 100.0% | 49.0% |
| 5056155 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.66 | 55.0 | 4.42e-01 | 100.0% | 49.0% |
| 5044574 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 57.0 | 4.00e-01 | 100.0% | 31.3% |
| 4975936 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.65 | 57.0 | 4.89e-01 | 100.0% | 64.0% |
| 3785289 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.65 | 53.0 | 4.84e-01 | 100.0% | 67.7% |
| 5029044 | 101.1.2.650 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7343 | 0.64 | 54.0 | 4.33e-01 | 100.0% | 49.5% |
| 5065568 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 54.0 | 4.03e-01 | 100.0% | 54.6% |
| 4506359 | 101.1.2.751 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6293_C | 0.64 | 52.0 | 4.43e-01 | 100.0% | 70.6% |
| 5037249 | 101.1.2.128 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2582 | 0.64 | 54.0 | 4.52e-01 | 100.0% | 58.8% |
| 5054757 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 54.0 | 4.06e-01 | 100.0% | 56.9% |
| 4945981 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 54.0 | 3.89e-01 | 100.0% | 33.6% |
| 4977903 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 53.0 | 4.53e-01 | 100.0% | 72.5% |
| 5045722 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.63 | 53.0 | 4.61e-01 | 100.0% | 65.3% |
| 3179915 | 101.1.2.124 ↗ | alpha arrays › HTH › HTH › winged helix domain › Kin17_mid | 0.63 | 53.0 | 3.90e-01 | 100.0% | 47.7% |
| 4966559 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 53.0 | 4.11e-01 | 100.0% | 42.7% |
| 4007720 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 53.0 | 4.62e-01 | 100.0% | 66.7% |
| 4942939 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.62 | 50.0 | 4.43e-01 | 93.5% | 65.7% |
| 3941961 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 51.0 | 4.12e-01 | 100.0% | 70.0% |
| 5077343 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 51.0 | 4.21e-01 | 100.0% | 65.6% |
| 4209274 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.61 | 52.0 | 3.40e-01 | 100.0% | 21.8% |
| 5047775 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.61 | 52.0 | 4.30e-01 | 97.8% | 54.1% |
| 5057765 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.61 | 55.0 | 4.51e-01 | 100.0% | 57.5% |
| 4973870 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 50.0 | 3.84e-01 | 100.0% | 38.3% |
| 4140374 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.60 | 53.0 | 4.33e-01 | 100.0% | 58.8% |
| 4998545 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 50.0 | 2.89e-01 | 100.0% | 10.1% |
| 5001182 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.16e-01 | 100.0% | 56.5% |
| 4937798 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.60 | 53.0 | 4.32e-01 | 100.0% | 60.0% |
| 4956853 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 49.0 | 4.15e-01 | 100.0% | 54.1% |
| 5016433 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 50.0 | 4.36e-01 | 100.0% | 64.0% |
| 3869516 | 327.11.2.56 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF28453 | 0.59 | 54.0 | 4.75e-01 | 100.0% | 75.4% |
| 3600265 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.59 | 49.0 | 3.76e-01 | 97.8% | 60.9% |
| 5077049 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.58 | 47.0 | 4.12e-01 | 93.5% | 57.3% |
| 4934946 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.58 | 47.0 | 3.98e-01 | 91.3% | 56.2% |
| 4422689 | 304.22.1.0 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain | 0.58 | 46.0 | 4.14e-01 | 100.0% | 64.0% |
| 4972963 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.58 | 46.0 | 3.51e-01 | 100.0% | 35.0% |
| 5042104 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.58 | 50.0 | 4.14e-01 | 95.7% | 60.0% |
| 3953647 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.58 | 49.0 | 3.87e-01 | 95.7% | 86.3% |
| 5314 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.58 | 48.0 | 3.85e-01 | 93.5% | 49.5% |
| 5060568 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.58 | 42.0 | 3.92e-01 | 93.5% | 61.7% |
| 4981719 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.58 | 50.0 | 4.50e-01 | 100.0% | 70.8% |
| 4976823 | 305.2.1.0 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) | 0.57 | 48.0 | 4.16e-01 | 100.0% | 58.7% |
| 3487937 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.57 | 48.0 | 4.45e-01 | 100.0% | 73.3% |
| 3346483 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 45.0 | 3.74e-01 | 91.3% | 52.9% |
| 3561147 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.56 | 48.0 | 4.53e-01 | 100.0% | 80.0% |
| 4942688 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.56 | 45.0 | 3.82e-01 | 91.3% | 56.2% |
| 4963691 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.56 | 49.0 | 3.94e-01 | 100.0% | 54.4% |
| 4945179 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 46.0 | 3.36e-01 | 100.0% | 50.3% |
| 5028744 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.55 | 44.0 | 3.62e-01 | 91.3% | 50.0% |
| 5040192 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.55 | 44.0 | 3.51e-01 | 91.3% | 44.1% |
| 4994261 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.55 | 47.0 | 3.93e-01 | 100.0% | 56.0% |
| 3664860 | 387.1.5.15 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SLR1-BP | 0.53 | 44.0 | 4.37e-01 | 97.8% | 88.0% |
| 5040129 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.53 | 42.0 | 3.51e-01 | 100.0% | 49.5% |
| 4497244 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.52 | 41.0 | 3.59e-01 | 91.3% | 60.0% |
| 5007807 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.52 | 41.0 | 3.48e-01 | 100.0% | 50.5% |
| 4929638 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.52 | 40.0 | 3.62e-01 | 91.3% | 62.9% |
| 2475411 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.52 | 41.0 | 3.59e-01 | 91.3% | 64.4% |
| 5082143 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.52 | 43.0 | 3.44e-01 | 100.0% | 47.6% |
| 4178993 | 304.28.1.27 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Med13_N | 0.51 | 44.0 | 3.50e-01 | 100.0% | 47.0% |
| 4964616 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.51 | 41.0 | 3.90e-01 | 100.0% | 78.3% |
| 4094055 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.51 | 39.0 | 3.29e-01 | 100.0% | 44.7% |
| 4826122 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.50 | 41.0 | 3.15e-01 | 100.0% | 72.1% |