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JQ965701.1__AFK13397.1__X__00006

Bact-Vir

JQ965701.1__AFK13397.1__X__00006

Identity

Accession:
JQ965701 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autotranscriptaviridae› Teseptimavirus› Yersinia_phage_YpP-R

TaxID: 1176765

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-85
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27024.1 best Phage_T7_kinase 48.6 9.40e-13 65.1% 13.8%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v07A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.64 45.0 4.07e-01 90.4% 54.5%
2oauA01 1.10.287.1260 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 40.0 3.77e-01 79.5% 65.7%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3241038 109.4.1.368 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SHNi-TPR 0.57 50.0 3.28e-01 100.0% 52.3%
3823212 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.53 46.0 3.89e-01 97.6% 57.1%