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JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00240
Bact-VirJSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00240
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 117-272
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19420.6 best | DDAH_eukar | 31.5 | 1.40e-07 | 100.0% | 57.2% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6juyC01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.97 | 93.0 | 7.51e-01 | 99.4% | 58.6% |
| 1h70A00 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.91 | 81.0 | 6.71e-01 | 100.0% | 56.5% |
| 1s9rA01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.87 | 82.0 | 6.33e-01 | 100.0% | 60.8% |
| 1rxxC01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.84 | 79.0 | 6.07e-01 | 100.0% | 58.1% |
| 1jdwA00 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.83 | 78.0 | 5.80e-01 | 100.0% | 45.0% |
| 8dpkD01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.82 | 78.0 | 6.31e-01 | 100.0% | 57.9% |
| 1bwdA00 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.82 | 77.0 | 5.79e-01 | 100.0% | 46.6% |
| 2c6zA00 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.80 | 76.0 | 6.15e-01 | 100.0% | 57.1% |
| 4yt9A01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.79 | 74.0 | 5.77e-01 | 100.0% | 65.8% |
| 1b6sA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 26.0 | 3.88e-01 | 88.5% | 100.0% |
| 2yx1A02 | 3.30.300.110 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Met-10+ protein-like domains | 0.55 | 25.0 | 3.38e-01 | 72.4% | 84.4% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 44.0 | 3.95e-01 | 91.0% | 95.2% |
| 4oteB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 33.0 | 3.56e-01 | 92.9% | 76.5% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2607846 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.97 | 94.0 | 7.41e-01 | 100.0% | 55.2% |
| 3953217 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.96 | 90.0 | 7.31e-01 | 100.0% | 57.4% |
| 3933039 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.96 | 92.0 | 7.43e-01 | 99.4% | 58.1% |
| 3284400 | 232.1.1.2 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › ADI | 0.96 | 90.0 | 7.31e-01 | 99.4% | 58.8% |
| 3230849 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.94 | 91.0 | 7.26e-01 | 100.0% | 58.0% |
| 5074653 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.93 | 82.0 | 6.76e-01 | 99.4% | 56.1% |
| 5060678 | 232.1.1.0 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein | 0.93 | 83.0 | 6.87e-01 | 100.0% | 58.1% |
| 7261 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.91 | 81.0 | 6.71e-01 | 100.0% | 56.5% |
| 4467417 | 232.1.1.0 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein | 0.91 | 80.0 | 6.57e-01 | 100.0% | 55.0% |
| 4984451 | 232.1.1.2 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › ADI | 0.91 | 87.0 | 6.61e-01 | 100.0% | 52.3% |
| 3958832 | 232.1.1.0 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein | 0.89 | 85.0 | 6.07e-01 | 100.0% | 47.0% |
| 3280858 | 232.1.1.2 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › ADI | 0.88 | 85.0 | 6.06e-01 | 100.0% | 49.4% |
| 4955230 | 232.1.1.2 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › ADI | 0.88 | 84.0 | 6.11e-01 | 100.0% | 47.9% |
| None | — | 0.87 | 83.0 | 5.91e-01 | 100.0% | 47.6% | |
| 4997283 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.87 | 83.0 | 6.58e-01 | 100.0% | 55.2% |
| 7263 | 232.1.1.2 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › ADI | 0.87 | 82.0 | 5.88e-01 | 100.0% | 47.4% |
| 3595190 | 232.1.1.0 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein | 0.86 | 82.0 | 6.11e-01 | 100.0% | 51.5% |
| 3596245 | 232.1.1.0 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein | 0.85 | 81.0 | 6.46e-01 | 100.0% | 57.9% |
| 153510 | 232.1.1.2 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › ADI | 0.82 | 77.0 | 5.61e-01 | 100.0% | 48.1% |
| 3403754 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.82 | 76.0 | 6.17e-01 | 100.0% | 56.3% |
| 3576969 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.81 | 77.0 | 6.26e-01 | 100.0% | 57.8% |
| 3732990 | 232.1.1.4 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › PAD_porph | 0.80 | 75.0 | 5.67e-01 | 100.0% | 66.4% |
| 4932786 | 232.1.1.1 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › eIF-6 | 0.74 | 67.0 | 6.32e-01 | 100.0% | 81.6% |
| 4623121 | 232.1.1.1 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › eIF-6 | 0.70 | 66.0 | 5.92e-01 | 100.0% | 96.2% |
| 4442243 | 327.1.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Alpha-lytic protease prodomain › Alpha-lytic protease prodomain › Pro_Al_protease | 0.67 | 26.0 | 3.83e-01 | 93.6% | 78.6% |
| 5054809 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.57 | 34.0 | 4.01e-01 | 83.3% | 84.8% |
| 3450898 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.51 | 27.0 | 3.62e-01 | 84.6% | 98.8% |
| 3253750 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.50 | 26.0 | 3.47e-01 | 85.9% | 96.2% |