JSantini_GMIN_scaffold_8_prodigal-single.1XX__00279

Bact-Vir

JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00279

Identity

83.5 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-70

PDB

Domain cluster: rep: MH766655.1__QDB70112.1__X__00009__D3-69

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1l8dA00	1.10.287.510	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.65	48.0	4.18e-01	81.0%	58.3%
4ijjB00	1.20.120.910	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain	0.65	54.0	4.41e-01	100.0%	52.3%
1ex0B02	3.90.260.10	Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like	0.55	38.0	2.51e-01	74.6%	89.3%
2f5xA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.51	36.0	2.96e-01	76.2%	39.5%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5064040	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.70	53.0	3.66e-01	81.0%	26.8%
5081618	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.70	54.0	4.27e-01	81.0%	44.2%
4328062	3008.1.1.0 ↗	a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	0.65	31.0	3.25e-01	81.0%	45.0%
3576609	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.63	47.0	2.96e-01	82.5%	18.0%