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JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00299
Bact-VirJSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00299
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-130
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bbaA00 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.69 | 56.0 | 4.15e-01 | 87.0% | 90.7% |
| 2j7qA00 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.65 | 57.0 | 4.37e-01 | 96.0% | 96.1% |
| 3tk9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 34.0 | 3.33e-01 | 76.0% | 46.7% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.64 | 49.0 | 3.55e-01 | 81.0% | 43.0% |
| 3h7oA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 33.0 | 3.23e-01 | 76.0% | 49.1% |
| 6heiA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 45.0 | 3.16e-01 | 86.0% | 88.3% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 39.0 | 3.54e-01 | 73.0% | 93.6% |
| 5chtB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 45.0 | 3.22e-01 | 87.0% | 97.7% |
| 5d3xB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 35.0 | 3.17e-01 | 71.0% | 85.1% |
| 1m55A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.51 | 43.0 | 3.48e-01 | 93.0% | 86.5% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 36.0 | 3.56e-01 | 76.0% | 93.6% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3232743 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.72 | 59.0 | 4.38e-01 | 87.0% | 89.4% |
| 4980573 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.72 | 59.0 | 4.66e-01 | 86.0% | 57.9% |
| 5013673 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.71 | 61.0 | 4.89e-01 | 90.0% | 71.1% |
| 5021450 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.70 | 60.0 | 4.75e-01 | 90.0% | 70.5% |
| 4951884 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.68 | 58.0 | 4.64e-01 | 90.0% | 70.8% |
| 3246337 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.66 | 54.0 | 4.26e-01 | 88.0% | 94.1% |
| 3188286 | 2011.1.1.21 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Gaa1 | 0.65 | 52.0 | 3.57e-01 | 85.0% | 37.1% |
| 5011019 | 3268.1.1.0 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase | 0.63 | 43.0 | 5.09e-01 | 74.0% | 100.0% |
| 4041829 | 219.1.1.21 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 | 0.60 | 48.0 | 3.71e-01 | 88.0% | 86.8% |
| 3684527 | 221.1.5.3 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Chemotaxis inhibitory protein CHIPS › DUF7734 | 0.58 | 40.0 | 4.13e-01 | 73.0% | 75.3% |
| 3290662 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 46.0 | 4.25e-01 | 86.0% | 100.0% |
| 3733057 | 7033.1.1.1 ↗ | a+b complex topology › Ribonuclease P protein subunit p40 › Ribonuclease P protein subunit p40 › Ribonuclease P protein subunit p40 › Ribonuc_P_40 | 0.56 | 38.0 | 2.63e-01 | 71.0% | 83.0% |
| 3740323 | 101.1.9.6 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N | 0.55 | 39.0 | 3.74e-01 | 74.0% | 84.3% |
| 4989883 | 3268.1.1.0 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase | 0.55 | 39.0 | 4.42e-01 | 79.0% | 97.3% |
| 3910960 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.54 | 41.0 | 3.90e-01 | 81.0% | 90.0% |
| 3253113 | 220.1.1.30 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH | 0.53 | 40.0 | 3.84e-01 | 81.0% | 93.0% |
| 3241885 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 37.0 | 3.51e-01 | 75.0% | 84.0% |
| 3963395 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.51 | 37.0 | 2.81e-01 | 75.0% | 92.9% |
| 5030570 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.51 | 36.0 | 3.06e-01 | 72.0% | 83.0% |
| 3476018 | 220.1.1.155 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26658 | 0.51 | 38.0 | 3.61e-01 | 80.0% | 81.3% |
| 4026300 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.51 | 36.0 | 3.55e-01 | 73.0% | 98.1% |
| 3250597 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.51 | 35.0 | 3.45e-01 | 72.0% | 86.4% |