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JX006077.1__AFM10417.1__PIS_028__00028

Bact-Vir

JX006077.1__AFM10417.1__PIS_028__00028

Identity

Accession:
JX006077 ↗
Kingdom:
phage

Quality

82.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 50-136
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF22525.2 best H2TH_5 31.7 1.80e-07 71.3% 70.4%
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bekD00 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.93 78.0 7.81e-01 92.0% 86.5%
1qyrA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.80 53.0 5.85e-01 83.9% 85.3%
3tqsA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.80 50.0 5.70e-01 81.6% 84.6%
3ftdA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.80 49.0 5.60e-01 82.8% 84.1%
4jxjA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.79 50.0 5.67e-01 79.3% 86.2%
8d8lM01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.78 58.0 5.98e-01 87.4% 82.7%
2vqeM01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.76 55.0 5.99e-01 94.3% 93.0%
4gc5A02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.74 58.0 5.77e-01 90.8% 80.0%
7zhgO01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.73 50.0 5.63e-01 85.1% 93.9%
6ifsB02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.72 53.0 5.77e-01 83.9% 94.4%
1mu5A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.72 59.0 6.15e-01 95.4% 98.7%
3twkA02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.69 60.0 4.99e-01 96.6% 55.0%
1tdzA02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.69 58.0 5.02e-01 90.8% 60.4%
3futA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.69 47.0 5.20e-01 81.6% 92.3%
1k82A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.69 54.0 4.81e-01 87.4% 59.3%
1k3xA02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.68 58.0 5.16e-01 94.3% 66.1%
3w0fA02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.65 56.0 4.86e-01 95.4% 62.5%
4mb7A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.65 56.0 4.70e-01 95.4% 61.9%
3vk8A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 56.0 4.65e-01 95.4% 65.8%
3gruA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.64 53.0 5.35e-01 89.7% 91.9%
1zq9A02 1.10.8.480 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.62 50.0 4.81e-01 87.4% 91.8%
4finB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 49.0 3.44e-01 86.2% 35.7%
3ozxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 48.0 3.45e-01 90.8% 40.1%
2janA03 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.55 43.0 4.11e-01 88.5% 73.7%
2k3oA00 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.54 42.0 3.70e-01 85.1% 86.0%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 38.0 3.28e-01 78.2% 92.6%
3uwcA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 45.0 3.98e-01 97.7% 85.9%
2xevB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 35.0 3.19e-01 75.9% 50.0%
7dl9A01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.50 43.0 3.46e-01 100.0% 66.5%
5u1aL00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 44.0 3.63e-01 100.0% 88.0%
6v3zA00 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.50 44.0 3.56e-01 100.0% 88.2%
6imeA01 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.50 35.0 2.59e-01 73.6% 44.7%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3283977 102.2.1.5 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH_5 0.91 78.0 7.40e-01 93.1% 78.0%
3282105 102.2.1.5 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH_5 0.89 76.0 7.39e-01 93.1% 83.0%
3603784 102.9.1.0 alpha arrays › HhH/H2TH › Cdc45 CID domain › Cdc45 CID domain 0.86 65.0 6.46e-01 86.2% 75.6%
5016076 1085.1.1.0 few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 0.84 64.0 6.24e-01 87.4% 72.6%
5038546 1085.1.1.1 few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 › DHH_CID 0.84 64.0 6.70e-01 86.2% 86.3%
3699849 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.82 62.0 6.26e-01 88.5% 80.0%
4100215 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.81 56.0 6.19e-01 85.1% 88.6%
5054212 1085.1.1.1 few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 › DHH_CID 0.81 65.0 6.60e-01 86.2% 85.9%
4930549 1085.1.1.0 few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 0.80 60.0 6.22e-01 86.2% 83.7%
5007630 1085.1.1.0 few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 0.80 60.0 6.14e-01 86.2% 80.0%
4981649 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.80 58.0 5.77e-01 87.4% 73.3%
4494056 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.80 63.0 5.71e-01 95.4% 63.5%
4298450 102.2.1.1 alpha arrays › HhH/H2TH › H2TH › H2TH › RrnaAD 0.79 56.0 6.10e-01 83.9% 90.0%
4953943 102.2.1.6 alpha arrays › HhH/H2TH › H2TH › H2TH › HI0933_like_1st 0.79 60.0 6.64e-01 86.2% 98.6%
2986054 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.78 58.0 5.94e-01 87.4% 80.7%
4858910 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.78 57.0 5.13e-01 87.4% 56.3%
3402309 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.78 59.0 6.02e-01 88.5% 82.4%
4937429 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.78 59.0 6.55e-01 94.3% 100.0%
4953872 1085.1.1.1 few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 › DHH_CID 0.77 60.0 6.43e-01 83.9% 93.3%
3555324 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.77 59.0 5.40e-01 88.5% 63.6%
4973104 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.77 57.0 5.05e-01 87.4% 55.8%
4995397 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.77 55.0 5.73e-01 87.4% 81.2%
5059459 1085.1.1.0 few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 0.76 59.0 6.11e-01 86.2% 87.5%
4283531 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.76 55.0 6.01e-01 88.5% 92.9%
3486672 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.76 59.0 5.88e-01 90.8% 78.9%
3311219 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.76 52.0 5.66e-01 81.6% 87.1%
4984919 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.76 63.0 5.29e-01 100.0% 53.8%
3430133 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.76 55.0 5.00e-01 87.4% 57.4%
4952077 102.2.1.6 alpha arrays › HhH/H2TH › H2TH › H2TH › HI0933_like_1st 0.76 57.0 6.27e-01 83.9% 97.1%
4118740 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.76 55.0 5.89e-01 83.9% 88.0%
5050147 1085.1.1.0 few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 0.76 56.0 6.24e-01 79.3% 95.7%
4934443 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.75 60.0 5.09e-01 94.3% 52.9%
4313858 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.75 53.0 5.81e-01 86.2% 91.4%
4975930 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.75 60.0 5.15e-01 94.3% 55.6%
4073009 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.74 54.0 5.76e-01 88.5% 88.0%
5051445 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.74 60.0 5.25e-01 96.6% 58.5%
3783643 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.74 56.0 4.99e-01 98.9% 57.5%
5039312 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.74 61.0 6.35e-01 96.6% 96.2%
4341142 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.74 55.0 5.02e-01 87.4% 60.2%
5044781 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.74 60.0 6.39e-01 90.8% 100.0%
4982925 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.74 61.0 6.21e-01 96.6% 91.8%
4975049 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.74 58.0 6.04e-01 83.9% 93.8%
4931056 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.73 59.0 6.30e-01 94.3% 100.0%
4979326 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.73 61.0 5.38e-01 100.0% 62.4%
4523909 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.73 54.0 5.03e-01 87.4% 61.8%
4994521 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.73 58.0 5.16e-01 94.3% 60.8%
2979137 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.73 54.0 4.92e-01 87.4% 59.3%
4999970 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.73 58.0 5.01e-01 94.3% 55.6%
5034089 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.73 60.0 5.31e-01 100.0% 62.4%
4968258 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.73 59.0 5.25e-01 100.0% 61.6%
5045440 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.73 59.0 5.18e-01 96.6% 59.2%
5077228 102.2.1.15 alpha arrays › HhH/H2TH › H2TH › H2TH › Topo-VIb_trans 0.72 56.0 4.97e-01 87.4% 57.6%
5062453 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.72 58.0 5.13e-01 94.3% 60.0%
4929481 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.72 61.0 6.36e-01 96.6% 100.0%
4271819 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.72 54.0 5.93e-01 86.2% 98.6%
5060576 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.71 55.0 5.71e-01 97.7% 87.5%
5031246 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.71 59.0 5.16e-01 100.0% 60.8%
4165472 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.71 56.0 5.05e-01 88.5% 62.6%
5069452 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.71 56.0 4.90e-01 90.8% 56.9%
1890282 1085.1.1.0 few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 0.71 66.0 4.26e-01 98.9% 30.1%
4114962 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.71 60.0 6.06e-01 96.6% 94.1%
5003054 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.71 57.0 4.91e-01 95.4% 56.3%
5010628 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.71 59.0 6.05e-01 96.6% 94.1%
3287874 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.70 59.0 5.88e-01 96.6% 88.9%
4648653 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.70 51.0 5.46e-01 86.2% 90.5%
4960632 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.70 56.0 5.87e-01 96.6% 96.2%
5074820 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.70 58.0 5.42e-01 94.3% 74.3%
3269953 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.70 57.0 5.91e-01 93.1% 97.5%
4206148 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.69 54.0 5.60e-01 90.8% 90.0%
5043778 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.69 57.0 5.97e-01 98.9% 98.8%
3175983 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 52.0 3.52e-01 87.4% 21.9%
5019728 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.69 55.0 5.61e-01 95.4% 89.4%
4483249 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.69 50.0 5.33e-01 89.7% 89.3%
4258382 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.69 52.0 5.41e-01 88.5% 87.5%
5079981 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.69 52.0 4.74e-01 85.1% 60.9%
4938159 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.69 55.0 5.81e-01 95.4% 100.0%
4996515 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.68 60.0 5.77e-01 96.6% 87.0%
5032908 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.68 60.0 5.63e-01 96.6% 84.8%
4281411 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.68 56.0 5.67e-01 96.6% 91.8%
5062293 102.2.1.15 alpha arrays › HhH/H2TH › H2TH › H2TH › Topo-VIb_trans 0.68 55.0 5.03e-01 95.4% 67.0%
4033402 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.68 58.0 5.68e-01 94.3% 88.4%
3783870 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.68 56.0 5.36e-01 90.8% 90.0%
3743821 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.67 54.0 4.56e-01 92.0% 52.4%
5054537 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.67 53.0 5.67e-01 93.1% 100.0%
4997687 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.67 52.0 4.74e-01 87.4% 62.6%
5059549 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.67 55.0 5.64e-01 97.7% 92.9%
4945709 102.2.1.14 alpha arrays › HhH/H2TH › H2TH › H2TH › zf-FPG_IleRS 0.67 60.0 5.76e-01 100.0% 87.0%
4942495 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.67 55.0 5.67e-01 98.9% 97.5%
4160379 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.66 58.0 5.50e-01 100.0% 81.0%
145647 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.66 59.0 5.53e-01 96.6% 99.0%
5066824 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.66 55.0 5.67e-01 98.9% 98.8%
5041518 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.66 57.0 5.58e-01 96.6% 87.4%
5035406 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.66 54.0 4.50e-01 87.4% 57.9%
5037279 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.66 50.0 5.39e-01 87.4% 100.0%
3861278 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.65 55.0 5.41e-01 95.4% 85.3%
1157322 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.65 57.0 5.54e-01 95.4% 90.5%
None 0.65 55.0 5.23e-01 95.4% 78.1%
4532012 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.65 56.0 5.72e-01 94.3% 96.5%
1622646 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.65 56.0 5.18e-01 95.4% 82.7%
4027268 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.64 48.0 4.91e-01 87.4% 82.4%