←Back to structures
JX006077.1__AFM10421.1__PIS_032__00032
Bact-VirJX006077.1__AFM10421.1__PIS_032__00032
Identity
- Accession:
- JX006077 ↗
- Kingdom:
- phage
Quality
71.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-84
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.64 | 35.0 | 3.51e-01 | 73.2% | 53.5% |
| 4g6tB00 | 6.10.20.120 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.63 | 42.0 | 4.20e-01 | 85.9% | 67.6% |
| 5ar1A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 50.0 | 3.53e-01 | 88.7% | 95.3% |
| 1pc6A00 | 1.10.3790.10 | Mainly Alpha › Orthogonal Bundle › NinB fold › NinB | 0.55 | 31.0 | 2.48e-01 | 81.7% | 29.1% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.54 | 30.0 | 2.70e-01 | 74.6% | 38.8% |
| 4lurA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.53 | 42.0 | 2.94e-01 | 87.3% | 65.0% |
| 3dmgA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 40.0 | 2.94e-01 | 83.1% | 77.3% |
| 3obaA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 33.0 | 2.18e-01 | 85.9% | 14.7% |
| 4djhA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 44.0 | 2.97e-01 | 98.6% | 70.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4931277 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.76 | 53.0 | 4.00e-01 | 71.8% | 43.2% |
| 4983992 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.71 | 53.0 | 4.05e-01 | 78.9% | 92.3% |
| 4998031 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.71 | 56.0 | 4.11e-01 | 83.1% | 95.4% |
| 5069995 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.69 | 52.0 | 3.61e-01 | 80.3% | 51.1% |
| 4945700 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 56.0 | 4.34e-01 | 88.7% | 82.0% |
| 4876714 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.68 | 48.0 | 3.50e-01 | 98.6% | 26.5% |
| 4927759 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.67 | 54.0 | 4.02e-01 | 84.5% | 92.5% |
| 4954852 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.65 | 51.0 | 3.73e-01 | 81.7% | 96.5% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.64 | 47.0 | 2.96e-01 | 83.1% | 15.5% |
| 5081199 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.64 | 45.0 | 3.45e-01 | 73.2% | 68.0% |
| 3458015 | 109.20.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Coatomer subunit alpha C-terminal domain › Coatomer subunit alpha C-terminal domain › COPI_C | 0.63 | 51.0 | 3.42e-01 | 85.9% | 58.0% |
| 4953737 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.60 | 51.0 | 3.90e-01 | 94.4% | 81.1% |
| 4002566 | 109.4.1.574 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NOC3p | 0.59 | 44.0 | 2.90e-01 | 77.5% | 39.6% |
| 4525886 | 109.4.1.1360 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CBF, NOC3p | 0.59 | 54.0 | 3.13e-01 | 100.0% | 43.5% |
| 2388540 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.58 | 53.0 | 3.81e-01 | 100.0% | 94.0% |
| 3337346 | 2002.1.1.234 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2+Meth_synt_1 | 0.54 | 43.0 | 2.98e-01 | 87.3% | 53.6% |
| 3739985 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.52 | 35.0 | 2.71e-01 | 74.6% | 32.3% |
| 3453496 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.50 | 39.0 | 2.48e-01 | 88.7% | 22.7% |