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JX006077.1__AFM10432.1__PIS_043__00043
Bact-VirJX006077.1__AFM10432.1__PIS_043__00043
Identity
- Accession:
- JX006077 ↗
- Kingdom:
- phage
Quality
73.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-110
Domain cluster:
rep: MK241539.2__AZU97333.1__X__00021__DFULL
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.60 | 42.0 | 3.81e-01 | 74.4% | 69.4% |
| 2bv6A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 40.0 | 3.40e-01 | 71.8% | 47.8% |
| 1z6tA04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 39.0 | 3.85e-01 | 70.5% | 69.4% |
| 3broD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 3.20e-01 | 71.8% | 57.5% |
| 3pqkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 3.54e-01 | 70.5% | 69.7% |
| 2gxgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 3.15e-01 | 71.8% | 60.7% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.32e-01 | 75.6% | 66.2% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.14e-01 | 73.1% | 62.9% |
| 1jgsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 37.0 | 3.08e-01 | 71.8% | 64.5% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 37.0 | 3.04e-01 | 71.8% | 53.4% |
| 1r1tA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.62e-01 | 76.9% | 67.3% |
| 5a48B00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.53 | 41.0 | 3.86e-01 | 100.0% | 67.7% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.20e-01 | 82.1% | 52.5% |
| 2qmaA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 34.0 | 2.98e-01 | 70.5% | 44.0% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 33.0 | 3.13e-01 | 70.5% | 53.1% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4965712 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.57 | 40.0 | 3.80e-01 | 73.1% | 80.0% |
| 5042411 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.57 | 39.0 | 3.82e-01 | 70.5% | 72.9% |
| 3282605 | 101.1.2.508 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25872 | 0.57 | 39.0 | 3.96e-01 | 71.8% | 76.2% |
| 4961793 | 101.1.2.929 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_2833_C | 0.56 | 43.0 | 2.92e-01 | 83.3% | 63.6% |
| 5069873 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 38.0 | 3.74e-01 | 70.5% | 69.4% |
| 5039360 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.55 | 42.0 | 3.91e-01 | 84.6% | 66.7% |
| 4968475 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 39.0 | 4.09e-01 | 94.9% | 84.3% |
| 5006536 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.54 | 36.0 | 3.49e-01 | 70.5% | 65.6% |
| 4929135 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.52 | 36.0 | 3.53e-01 | 73.1% | 70.0% |
| 4992848 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 37.0 | 3.37e-01 | 76.9% | 60.9% |
| 5036162 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 36.0 | 3.25e-01 | 71.8% | 60.0% |
| 3819120 | 101.1.2.120 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDRGK | 0.52 | 40.0 | 3.72e-01 | 87.2% | 86.7% |
| 4967633 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.52 | 35.0 | 3.39e-01 | 70.5% | 66.7% |
| 5037176 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.51 | 38.0 | 3.67e-01 | 92.3% | 70.0% |
| 5031317 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 37.0 | 3.33e-01 | 82.1% | 67.5% |