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JX006077.1__AFM10508.1__PIS_121__00121
Bact-VirJX006077.1__AFM10508.1__PIS_121__00121
Identity
- Accession:
- JX006077 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-91
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16827.11 best | zf-HC3 | 67.7 | 1.20e-18 | 75.0% | 100.0% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c3iA04 | 1.10.274.100 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 | 0.55 | 45.0 | 3.70e-01 | 100.0% | 48.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 146963 | 3185.1.1.1 ↗ | a+b two layers › uncharacterized protein Svir_20580 › uncharacterized protein Svir_20580 › uncharacterized protein Svir_20580 › zf-HC3 | 0.90 | 76.0 | 6.94e-01 | 88.6% | 70.3% |
| 4933326 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.63 | 37.0 | 3.79e-01 | 89.8% | 58.0% |
| 4928472 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.61 | 36.0 | 3.77e-01 | 89.8% | 63.7% |
| 3734823 | 2003.1.1.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 | 0.55 | 46.0 | 3.26e-01 | 93.2% | 62.1% |
| 3232791 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.52 | 38.0 | 3.43e-01 | 79.5% | 94.6% |
| 4403559 | 3646.1.1.1 ↗ | alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ | 0.52 | 41.0 | 3.03e-01 | 87.5% | 62.8% |
| 2895133 | 173.1.1.0 ↗ | alpha arrays › Uteroglobin-like › Uteroglobin-like › Uteroglobin-like | 0.51 | 35.0 | 3.57e-01 | 95.5% | 72.6% |