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JX094500.1__AFO71324.1__CR5_104__00104
Bact-VirJX094500.1__AFO71324.1__CR5_104__00104
Identity
- Accession:
- JX094500 ↗
- Kingdom:
- phage
Quality
70.0
mean pLDDT
Taxonomy
TaxID: 1195085
Cluster
View cluster (47 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-59
D2
high
residues 62-131
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p8aA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.68 | 46.0 | 3.56e-01 | 100.0% | 30.6% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.65 | 47.0 | 3.29e-01 | 77.1% | 67.1% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 37.0 | 4.04e-01 | 94.3% | 76.8% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 41.0 | 4.07e-01 | 85.7% | 68.0% |
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 44.0 | 2.86e-01 | 82.9% | 19.9% |
| 1jc4A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 45.0 | 3.61e-01 | 100.0% | 40.0% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 43.0 | 2.88e-01 | 80.0% | 27.1% |
| 1uswA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 43.0 | 2.94e-01 | 100.0% | 21.2% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 42.0 | 3.50e-01 | 82.9% | 41.4% |
| 2fgeA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.58 | 35.0 | 2.41e-01 | 72.9% | 15.9% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.58 | 44.0 | 2.75e-01 | 81.4% | 17.9% |
| 1lgyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 47.0 | 3.25e-01 | 97.1% | 24.5% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 40.0 | 3.84e-01 | 85.7% | 63.0% |
| 3ghjA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 50.0 | 4.23e-01 | 97.1% | 92.2% |
| 2p25A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 49.0 | 4.11e-01 | 97.1% | 97.5% |
| 1wnhA01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 42.0 | 3.76e-01 | 81.4% | 64.0% |
| 3e5dA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 48.0 | 4.00e-01 | 97.1% | 95.2% |
| 2v94B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 42.0 | 3.92e-01 | 84.3% | 77.4% |
| 3iuzA00 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.55 | 48.0 | 3.18e-01 | 100.0% | 30.3% |
| 6w1kA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.55 | 48.0 | 3.21e-01 | 100.0% | 34.0% |
| 7pkwA01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 41.0 | 3.67e-01 | 81.4% | 68.9% |
| 1uhzA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 37.0 | 3.47e-01 | 71.4% | 61.8% |
| 4mb4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 48.0 | 4.62e-01 | 100.0% | 87.3% |
| 3lhoA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.54 | 47.0 | 3.31e-01 | 100.0% | 37.2% |
| 2xlpB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 43.0 | 2.83e-01 | 91.4% | 45.2% |
| 3zjbA00 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.54 | 40.0 | 2.95e-01 | 78.6% | 43.0% |
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 35.0 | 3.31e-01 | 97.1% | 53.3% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 46.0 | 2.99e-01 | 100.0% | 93.9% |
| 1wzvA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 39.0 | 3.06e-01 | 85.7% | 36.7% |
| 1ajwA00 | 2.70.50.30 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › Coagulation Factor XIII, subunit A, domain 1 | 0.52 | 44.0 | 3.58e-01 | 100.0% | 73.8% |
| 5hl8C00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.52 | 39.0 | 3.82e-01 | 84.3% | 96.2% |
| 3qcmA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 44.0 | 2.98e-01 | 100.0% | 25.2% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.51 | 33.0 | 3.87e-01 | 72.9% | 97.9% |
| 8dajA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 44.0 | 2.98e-01 | 100.0% | 43.3% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.76e-01 | 90.0% | 81.5% |
| 1jllB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 41.0 | 3.34e-01 | 95.7% | 69.7% |
| 6melB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 41.0 | 3.33e-01 | 95.7% | 71.0% |
| 1l3wA03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.50 | 44.0 | 3.77e-01 | 100.0% | 89.5% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4953759 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.65 | 45.0 | 4.79e-01 | 82.9% | 85.0% |
| 4972587 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.64 | 46.0 | 3.61e-01 | 78.6% | 34.4% |
| 3959258 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.64 | 47.0 | 4.51e-01 | 98.6% | 68.8% |
| 4101633 | 243.3.1.5 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP | 0.63 | 53.0 | 4.65e-01 | 97.1% | 76.4% |
| 3439915 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.62 | 47.0 | 3.09e-01 | 81.4% | 25.1% |
| 3391894 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.61 | 37.0 | 3.72e-01 | 97.1% | 60.0% |
| 3640355 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.60 | 51.0 | 4.00e-01 | 97.1% | 87.7% |
| 5014316 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 45.0 | 3.54e-01 | 82.9% | 36.9% |
| 4008035 | 223.1.1.112 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30417 | 0.59 | 47.0 | 3.14e-01 | 85.7% | 65.8% |
| 5683 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.59 | 45.0 | 4.56e-01 | 100.0% | 81.7% |
| 4014679 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.58 | 49.0 | 3.11e-01 | 97.1% | 36.7% |
| 3416488 | 316.1.1.10 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Nrap | 0.58 | 50.0 | 3.50e-01 | 100.0% | 59.6% |
| 3727648 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.58 | 48.0 | 2.85e-01 | 95.7% | 22.3% |
| 3731474 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.58 | 49.0 | 3.29e-01 | 98.6% | 45.3% |
| 3326445 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 43.0 | 2.80e-01 | 82.9% | 21.6% |
| 3485537 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.58 | 42.0 | 2.56e-01 | 80.0% | 14.3% |
| 3584922 | 5.1.4.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 | 0.57 | 43.0 | 2.97e-01 | 81.4% | 23.2% |
| 4875999 | 309.1.1.2 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16,Peptidase_M16_C | 0.57 | 37.0 | 2.49e-01 | 82.9% | 15.6% |
| 4540367 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.57 | 47.0 | 3.06e-01 | 98.6% | 19.1% |
| 5034595 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.57 | 49.0 | 3.74e-01 | 100.0% | 55.2% |
| 3591269 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.57 | 42.0 | 2.75e-01 | 80.0% | 18.4% |
| 4106050 | 316.1.1.6 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Mab-21 | 0.56 | 49.0 | 3.40e-01 | 98.6% | 65.3% |
| 3291057 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 42.0 | 4.22e-01 | 82.9% | 80.0% |
| 3191059 | 705.1.1.0 ↗ | beta duplicates or obligate multimers › Cyanovirin-N › Cyanovirin-N › Cyanovirin-N | 0.56 | 43.0 | 3.70e-01 | 85.7% | 82.5% |
| 4961329 | 2003.1.3.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase | 0.56 | 44.0 | 2.97e-01 | 88.6% | 49.5% |
| 3869953 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 42.0 | 2.69e-01 | 82.9% | 16.4% |
| 4650667 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.56 | 36.0 | 3.25e-01 | 94.3% | 46.0% |
| 4013811 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.55 | 41.0 | 3.85e-01 | 82.9% | 71.1% |
| 4123449 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.54 | 37.0 | 3.57e-01 | 75.7% | 60.0% |
| 3348291 | 243.1.1.53 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › WI12 | 0.54 | 40.0 | 3.20e-01 | 82.9% | 52.5% |
| 4997208 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.54 | 41.0 | 2.72e-01 | 81.4% | 63.4% |
| 3712993 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 37.0 | 3.67e-01 | 78.6% | 68.0% |
| 3256189 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.54 | 47.0 | 3.01e-01 | 100.0% | 21.9% |
| 5001533 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.53 | 46.0 | 3.69e-01 | 100.0% | 57.4% |
| 4020042 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.53 | 44.0 | 3.11e-01 | 95.7% | 54.0% |
| 3394789 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 41.0 | 3.61e-01 | 85.7% | 58.2% |
| 4091857 | 310.3.1.4 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GspL_C | 0.53 | 40.0 | 3.35e-01 | 82.9% | 60.8% |
| 1117621 | 3307.1.1.1 ↗ | a+b two layers › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 › Hen1_Lam_C | 0.53 | 44.0 | 3.77e-01 | 100.0% | 73.4% |
| 3320258 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.53 | 43.0 | 2.84e-01 | 91.4% | 81.9% |
| 3692341 | 2003.1.2.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like | 0.52 | 42.0 | 2.73e-01 | 90.0% | 40.0% |
| 4928264 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.52 | 39.0 | 2.86e-01 | 85.7% | 91.9% |
| 3581140 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.52 | 43.0 | 2.98e-01 | 100.0% | 26.8% |
| 4023011 | 2003.1.3.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 | 0.52 | 43.0 | 3.18e-01 | 100.0% | 48.4% |
| 3487318 | 11.1.1.54 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 | 0.52 | 43.0 | 3.59e-01 | 95.7% | 79.2% |
| 3935356 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.52 | 36.0 | 3.04e-01 | 77.1% | 42.5% |
| 3738244 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.52 | 44.0 | 2.99e-01 | 100.0% | 26.8% |
| 1549078 | 274.1.1.14 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComP_DUS | 0.51 | 45.0 | 4.18e-01 | 100.0% | 79.8% |
| 3408423 | 11.1.1.54 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 | 0.51 | 43.0 | 3.57e-01 | 95.7% | 80.0% |
| 3505411 | 11.1.1.54 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 | 0.51 | 43.0 | 3.49e-01 | 95.7% | 72.9% |
| 4882787 | 375.1.1.67 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N | 0.51 | 31.0 | 3.44e-01 | 100.0% | 87.2% |
| 3732816 | 11.1.1.54 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 | 0.50 | 39.0 | 3.29e-01 | 88.6% | 76.9% |