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JX100810.1__AFU88130.1__CcrColossus_gp260__00260
Bact-VirJX100810.1__AFU88130.1__CcrColossus_gp260__00260
Identity
- Accession:
- JX100810 ↗
- Kingdom:
- phage
Quality
72.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Colossusvirus›
Caulobacter_phage_CcrColossus
TaxID: 1211640
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-77
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5yrzB00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.67 | 49.0 | 5.29e-01 | 97.2% | 96.6% |
| 2r5vB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.67 | 49.0 | 3.60e-01 | 78.9% | 75.9% |
| 6bu2A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.66 | 48.0 | 3.80e-01 | 77.5% | 46.7% |
| 1sp8C01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.65 | 50.0 | 3.71e-01 | 81.7% | 70.3% |
| 3uuwB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.64 | 50.0 | 3.73e-01 | 84.5% | 72.8% |
| 5eo6B00 | 3.40.1500.10 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic | 0.64 | 56.0 | 3.66e-01 | 98.6% | 71.3% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 46.0 | 4.42e-01 | 76.1% | 71.6% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.63 | 52.0 | 4.25e-01 | 100.0% | 80.8% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 44.0 | 4.36e-01 | 76.1% | 84.2% |
| 7clgA01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.61 | 46.0 | 3.36e-01 | 78.9% | 65.8% |
| 2v7sA00 | 3.30.2030.20 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.61 | 46.0 | 3.54e-01 | 98.6% | 34.9% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 43.0 | 3.78e-01 | 76.1% | 53.2% |
| 1w2tA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.60 | 43.0 | 3.52e-01 | 76.1% | 81.3% |
| 3ip3A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 46.0 | 3.39e-01 | 85.9% | 73.9% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.59 | 47.0 | 3.76e-01 | 88.7% | 77.2% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 41.0 | 4.13e-01 | 76.1% | 81.7% |
| 3e5dA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 51.0 | 4.26e-01 | 100.0% | 91.2% |
| 2kuqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 40.0 | 3.15e-01 | 74.6% | 46.4% |
| 2imqX00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.57 | 49.0 | 3.31e-01 | 98.6% | 86.1% |
| 3i1aA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 44.0 | 3.99e-01 | 88.7% | 91.3% |
| 3c1aA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 47.0 | 3.82e-01 | 100.0% | 47.6% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 39.0 | 3.39e-01 | 76.1% | 90.8% |
| 3bt3A01 | 3.30.1900.10 | Alpha Beta › 2-Layer Sandwich › glyoxalase-related enzyme like fold › glyoxalase-related enzyme like domain | 0.55 | 40.0 | 4.05e-01 | 83.1% | 77.8% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.55 | 47.0 | 3.51e-01 | 95.8% | 66.5% |
| 1epwA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 39.0 | 2.79e-01 | 77.5% | 47.6% |
| 3qmfA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.54 | 45.0 | 3.68e-01 | 93.0% | 86.6% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 45.0 | 4.07e-01 | 95.8% | 91.9% |
| 2bkwA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 46.0 | 3.94e-01 | 100.0% | 78.3% |
| 4n81A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.53 | 42.0 | 3.44e-01 | 87.3% | 91.2% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 45.0 | 4.20e-01 | 100.0% | 80.9% |
| 2wkkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 41.0 | 3.25e-01 | 87.3% | 68.0% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 42.0 | 4.30e-01 | 94.4% | 98.6% |
| 2gk4A00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.51 | 44.0 | 3.15e-01 | 100.0% | 88.2% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 44.0 | 4.29e-01 | 100.0% | 93.6% |
| 4ozxA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 2.82e-01 | 91.5% | 58.9% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.51 | 40.0 | 4.12e-01 | 90.1% | 96.9% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.51 | 38.0 | 3.26e-01 | 83.1% | 48.8% |
| 5ighA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 40.0 | 3.84e-01 | 91.5% | 97.7% |
| 6hgcA01 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.50 | 42.0 | 3.18e-01 | 97.2% | 77.5% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3418904 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.69 | 53.0 | 4.76e-01 | 83.1% | 84.0% |
| 3427945 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.69 | 53.0 | 4.73e-01 | 83.1% | 86.0% |
| 2330317 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.67 | 49.0 | 5.29e-01 | 97.2% | 96.6% |
| 3301602 | 5.1.2.41 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40_RFWD3 | 0.66 | 47.0 | 3.56e-01 | 76.1% | 41.7% |
| 3588002 | 298.1.1.20 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › YceM-like_C | 0.65 | 50.0 | 3.72e-01 | 83.1% | 69.7% |
| 3479226 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.64 | 53.0 | 4.86e-01 | 97.2% | 98.0% |
| 4408461 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.64 | 47.0 | 3.48e-01 | 78.9% | 37.7% |
| 3988707 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 44.0 | 4.89e-01 | 76.1% | 100.0% |
| 3616221 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 44.0 | 3.48e-01 | 77.5% | 55.8% |
| 3236101 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.62 | 54.0 | 4.81e-01 | 97.2% | 77.0% |
| 3633449 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 42.0 | 3.25e-01 | 71.8% | 71.8% |
| 3783578 | 5.1.5.10 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › ANAPC4_WD40 | 0.61 | 42.0 | 2.83e-01 | 71.8% | 43.9% |
| 3463325 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 44.0 | 3.07e-01 | 78.9% | 93.7% |
| 3517889 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.59 | 52.0 | 4.57e-01 | 95.8% | 76.9% |
| 1170462 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.59 | 41.0 | 4.38e-01 | 74.6% | 91.8% |
| 3983275 | 7515.1.1.5 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,SGSH_C | 0.58 | 44.0 | 2.68e-01 | 81.7% | 13.8% |
| 4237612 | 3006.1.1.6 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › CPSF73-100_C | 0.57 | 47.0 | 4.44e-01 | 91.5% | 80.0% |
| 3682351 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.57 | 49.0 | 3.61e-01 | 95.8% | 84.9% |
| 3436093 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 48.0 | 4.73e-01 | 97.2% | 94.7% |
| 3380327 | 5.1.10.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › WD40_RFWD3 | 0.56 | 40.0 | 3.64e-01 | 76.1% | 58.0% |
| 3354455 | 5.1.11.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › RAB3GAP2_N | 0.56 | 49.0 | 3.05e-01 | 98.6% | 92.9% |
| 4243044 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.56 | 47.0 | 3.58e-01 | 93.0% | 50.6% |
| 3965259 | 243.3.1.16 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY_2 | 0.56 | 40.0 | 3.97e-01 | 76.1% | 78.4% |
| 3328759 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 47.0 | 4.67e-01 | 97.2% | 98.7% |
| 3655368 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 47.0 | 4.64e-01 | 97.2% | 94.7% |
| 3847839 | 6129.1.1.0 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family | 0.55 | 48.0 | 3.32e-01 | 97.2% | 37.1% |
| 3858171 | 6129.1.1.0 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family | 0.55 | 46.0 | 3.19e-01 | 93.0% | 36.7% |
| 3284774 | 321.1.1.11 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › DUF2126 | 0.55 | 46.0 | 2.95e-01 | 98.6% | 27.9% |
| 4114374 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.54 | 48.0 | 3.49e-01 | 97.2% | 49.2% |
| 3755673 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.54 | 47.0 | 3.36e-01 | 97.2% | 42.4% |
| 5025461 | 3347.1.1.0 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 | 0.53 | 37.0 | 3.69e-01 | 74.6% | 84.0% |
| 3765561 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.52 | 42.0 | 2.95e-01 | 88.7% | 56.6% |
| 3169357 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.52 | 44.0 | 3.89e-01 | 98.6% | 71.8% |
| 3748189 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 42.0 | 4.16e-01 | 97.2% | 90.0% |
| 3496930 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 35.0 | 2.41e-01 | 70.4% | 56.9% |
| 3974914 | 7089.1.1.4 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › FlgI | 0.51 | 45.0 | 3.78e-01 | 95.8% | 62.6% |
| 3215164 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.51 | 42.0 | 3.13e-01 | 91.5% | 61.4% |
| 3882656 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 43.0 | 2.82e-01 | 100.0% | 93.8% |
| 3574641 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.51 | 42.0 | 3.15e-01 | 100.0% | 71.0% |
| 4587441 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.50 | 42.0 | 2.89e-01 | 100.0% | 74.6% |