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JX100814.1__AFU86781.1__CcrRogue_gp299__00299
Bact-VirJX100814.1__AFU86781.1__CcrRogue_gp299__00299
Identity
- Accession:
- JX100814 ↗
- Kingdom:
- phage
Quality
86.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Poindextervirus›
Caulobacter_phage_CcrRogue
TaxID: 2927986
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-68
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 51.0 | 4.33e-01 | 95.6% | 71.3% |
| 2eshA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 52.0 | 4.46e-01 | 100.0% | 78.9% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 4.44e-01 | 94.1% | 83.3% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 51.0 | 4.47e-01 | 100.0% | 82.9% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 4.44e-01 | 94.1% | 92.1% |
| 3e0jB00 | 3.90.1030.20 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 0.57 | 42.0 | 3.31e-01 | 79.4% | 73.4% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.56 | 48.0 | 3.25e-01 | 98.5% | 56.6% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 3.97e-01 | 80.9% | 84.4% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.54 | 36.0 | 3.20e-01 | 75.0% | 48.5% |
| 3pxpA02 | 3.30.450.180 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 38.0 | 2.90e-01 | 80.9% | 82.4% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 38.0 | 2.56e-01 | 77.9% | 21.1% |
| 1epwA04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 42.0 | 3.09e-01 | 89.7% | 90.1% |
| 3l4gC01 | 3.30.1370.240 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 43.0 | 3.81e-01 | 97.1% | 78.1% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.51 | 38.0 | 2.44e-01 | 82.4% | 48.9% |
| 1g5qA00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.51 | 38.0 | 2.94e-01 | 85.3% | 62.1% |
| 3fo3A02 | 1.10.1130.10 | Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A | 0.50 | 36.0 | 2.33e-01 | 76.5% | 39.4% |
| 1qlmA02 | 3.30.1030.10 | Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 | 0.50 | 38.0 | 2.79e-01 | 83.8% | 68.2% |
| 1cnzA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.50 | 36.0 | 2.33e-01 | 76.5% | 47.7% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3933222 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.71 | 61.0 | 4.80e-01 | 100.0% | 67.1% |
| 4998735 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 59.0 | 4.79e-01 | 97.1% | 74.1% |
| 5026539 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 55.0 | 5.07e-01 | 89.7% | 88.9% |
| 3940070 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.67 | 47.0 | 3.04e-01 | 73.5% | 51.2% |
| 3977489 | 377.1.1.117 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF27493 | 0.66 | 38.0 | 4.36e-01 | 72.1% | 78.0% |
| 4988082 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 54.0 | 5.44e-01 | 95.6% | 100.0% |
| 4944735 | 101.1.2.542 ↗ | alpha arrays › HTH › HTH › winged helix domain › ATPase_2 | 0.64 | 45.0 | 3.68e-01 | 73.5% | 44.0% |
| 3730463 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 55.0 | 4.54e-01 | 98.5% | 80.0% |
| 3986225 | 101.1.9.32 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT | 0.64 | 47.0 | 3.35e-01 | 77.9% | 31.2% |
| 4029392 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.64 | 49.0 | 3.66e-01 | 85.3% | 42.7% |
| 4997255 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 54.0 | 4.83e-01 | 98.5% | 83.0% |
| 4982343 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 52.0 | 4.03e-01 | 91.2% | 54.8% |
| 4009252 | 3371.1.1.2 ↗ | few secondary structure elements › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › PF27493 | 0.63 | 40.0 | 4.55e-01 | 85.3% | 88.0% |
| 4014683 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.63 | 54.0 | 4.46e-01 | 100.0% | 77.7% |
| 5050502 | 243.18.1.0 ↗ | a+b two layers › Cystatin-like › Maltokinase N-terminal domain › Maltokinase N-terminal domain | 0.63 | 46.0 | 3.56e-01 | 77.9% | 48.7% |
| 3791945 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.62 | 42.0 | 2.98e-01 | 94.1% | 21.3% |
| 3281879 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.62 | 53.0 | 3.89e-01 | 95.6% | 48.9% |
| 3169451 | 109.4.1.3193 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT, Suf, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 0.62 | 50.0 | 2.92e-01 | 92.6% | 16.5% |
| 3603693 | 101.1.2.145 ↗ | alpha arrays › HTH › HTH › winged helix domain › HHH_4 | 0.62 | 48.0 | 3.67e-01 | 86.8% | 73.5% |
| 3941757 | 101.1.9.32 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT | 0.61 | 46.0 | 3.73e-01 | 80.9% | 45.4% |
| 2391543 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.61 | 52.0 | 3.85e-01 | 100.0% | 45.2% |
| 4947062 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 50.0 | 4.56e-01 | 94.1% | 89.5% |
| 3978692 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.60 | 43.0 | 3.40e-01 | 77.9% | 43.3% |
| 3278037 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.59 | 51.0 | 3.69e-01 | 97.1% | 45.1% |
| 4401786 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.58 | 45.0 | 3.99e-01 | 86.8% | 68.6% |
| 5075144 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.58 | 44.0 | 4.30e-01 | 82.4% | 78.7% |
| 5003912 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 48.0 | 3.84e-01 | 100.0% | 81.2% |
| 3589192 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.57 | 44.0 | 4.24e-01 | 88.2% | 87.5% |
| 3494392 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.57 | 38.0 | 2.39e-01 | 70.6% | 57.6% |
| 4004118 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.56 | 43.0 | 3.34e-01 | 89.7% | 42.2% |
| 3306699 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.55 | 44.0 | 2.78e-01 | 88.2% | 20.6% |
| 4966558 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 47.0 | 4.43e-01 | 98.5% | 95.3% |
| 3220485 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.55 | 38.0 | 2.49e-01 | 73.5% | 51.9% |
| 4325040 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.54 | 45.0 | 3.78e-01 | 98.5% | 70.8% |
| 5028348 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.54 | 42.0 | 3.16e-01 | 89.7% | 82.6% |
| None | — | 0.54 | 45.0 | 2.87e-01 | 97.1% | 21.9% | |
| 3998693 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.54 | 39.0 | 2.52e-01 | 82.4% | 55.3% |
| 3234312 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.53 | 36.0 | 2.28e-01 | 70.6% | 58.4% |
| 5070883 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.53 | 42.0 | 3.99e-01 | 94.1% | 76.7% |
| 3963812 | 3170.1.1.0 ↗ | a+b two layers › uncharacterized protein YP_926445.1 › uncharacterized protein YP_926445.1 › uncharacterized protein YP_926445.1 | 0.53 | 40.0 | 3.46e-01 | 83.8% | 64.5% |
| 4508433 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.52 | 43.0 | 2.77e-01 | 95.6% | 20.0% |
| 3212571 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.52 | 37.0 | 2.33e-01 | 75.0% | 57.7% |
| 5051696 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.52 | 37.0 | 4.00e-01 | 91.2% | 94.5% |
| 4975725 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.52 | 44.0 | 3.07e-01 | 94.1% | 61.8% |
| 3513009 | 5.1.12.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains | 0.52 | 35.0 | 2.38e-01 | 70.6% | 17.7% |
| 3621798 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.52 | 37.0 | 2.31e-01 | 75.0% | 60.8% |
| 4981949 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 4.04e-01 | 95.6% | 96.2% |
| 5029277 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.52 | 42.0 | 3.79e-01 | 98.5% | 70.5% |
| 3992603 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.51 | 33.0 | 2.29e-01 | 75.0% | 15.8% |
| 3998873 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.51 | 37.0 | 2.49e-01 | 75.0% | 81.2% |
| 3515339 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.51 | 36.0 | 2.24e-01 | 75.0% | 55.4% |
| 4277614 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.51 | 41.0 | 3.66e-01 | 98.5% | 81.8% |
| 3222904 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.50 | 36.0 | 2.26e-01 | 76.5% | 59.5% |
| 3578140 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.50 | 36.0 | 2.26e-01 | 76.5% | 58.4% |
| 3211467 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.50 | 36.0 | 2.25e-01 | 76.5% | 57.7% |
| 3578921 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.50 | 36.0 | 2.28e-01 | 76.5% | 61.1% |
D2
medium
residues 69-142
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yrrA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.63 | 46.0 | 4.04e-01 | 78.4% | 82.0% |
| 5yrzB00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.62 | 45.0 | 5.03e-01 | 97.3% | 98.3% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.60 | 45.0 | 4.61e-01 | 100.0% | 83.3% |
| 3rheA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 33.0 | 2.88e-01 | 100.0% | 34.2% |
| 3caiA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 41.0 | 3.41e-01 | 77.0% | 69.8% |
| 2kfpA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.57 | 49.0 | 4.21e-01 | 100.0% | 81.6% |
| 3kl0D01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 42.0 | 3.79e-01 | 83.8% | 98.1% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.55 | 47.0 | 4.19e-01 | 93.2% | 94.2% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.55 | 46.0 | 4.05e-01 | 94.6% | 63.5% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 45.0 | 2.96e-01 | 90.5% | 81.3% |
| 2yh6D00 | 3.30.530.50 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.55 | 49.0 | 4.29e-01 | 100.0% | 86.4% |
| 3b46A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 41.0 | 3.16e-01 | 79.7% | 64.5% |
| 2e7jA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 40.0 | 3.55e-01 | 79.7% | 84.8% |
| 4nkbB02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.54 | 35.0 | 3.31e-01 | 82.4% | 53.3% |
| 2g7jA00 | 3.90.1150.40 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Protein of unknown function DUF2002 | 0.53 | 46.0 | 4.11e-01 | 100.0% | 83.9% |
| 2rprA00 | 2.20.25.240 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 39.0 | 3.74e-01 | 78.4% | 74.7% |
| 2pokA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 43.0 | 2.95e-01 | 90.5% | 83.7% |
| 2w39A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 40.0 | 2.76e-01 | 83.8% | 29.5% |
| 3fd0A01 | 3.90.1150.60 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Methioning gamme-lyase, C-terminal domain | 0.53 | 46.0 | 3.47e-01 | 100.0% | 45.1% |
| 4ix8A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 38.0 | 3.11e-01 | 78.4% | 66.4% |
| 4my5D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 38.0 | 3.04e-01 | 79.7% | 58.2% |
| 3nraA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 37.0 | 2.97e-01 | 100.0% | 35.6% |
| 6d0aA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 41.0 | 3.61e-01 | 89.2% | 84.3% |
| 2douB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 35.0 | 2.89e-01 | 98.6% | 36.2% |
| 1fu1A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.51 | 39.0 | 3.33e-01 | 82.4% | 100.0% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3286115 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.62 | 52.0 | 4.49e-01 | 91.9% | 87.0% |
| 3325869 | 3016.1.1.14 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Met_gamma_lyase | 0.61 | 46.0 | 4.49e-01 | 81.1% | 91.3% |
| 3235793 | 708.1.1.31 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › PF29684 | 0.60 | 44.0 | 4.54e-01 | 78.4% | 88.6% |
| 3598389 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.59 | 44.0 | 3.81e-01 | 81.1% | 90.8% |
| 3227619 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.57 | 41.0 | 3.13e-01 | 77.0% | 47.0% |
| 4114928 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.57 | 41.0 | 3.11e-01 | 77.0% | 45.9% |
| 3193432 | 331.9.1.1 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C | 0.56 | 50.0 | 4.21e-01 | 100.0% | 64.0% |
| 1806521 | 331.3.1.50 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PF29358 | 0.56 | 50.0 | 4.22e-01 | 100.0% | 76.6% |
| 3203216 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 36.0 | 3.03e-01 | 100.0% | 36.0% |
| 3778012 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.55 | 41.0 | 3.91e-01 | 78.4% | 75.3% |
| 1316646 | 3016.1.1.13 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SepSecS | 0.55 | 41.0 | 3.58e-01 | 81.1% | 80.5% |
| 3281426 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.55 | 38.0 | 4.11e-01 | 98.6% | 88.3% |
| 3806929 | 331.9.1.1 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C | 0.55 | 48.0 | 4.09e-01 | 100.0% | 66.4% |
| 4929824 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.55 | 48.0 | 3.90e-01 | 100.0% | 62.1% |
| 3965967 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 40.0 | 3.73e-01 | 86.5% | 69.0% |
| 3555343 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 37.0 | 2.85e-01 | 75.7% | 36.8% |
| 3978651 | 241.13.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › Sif | 0.52 | 43.0 | 3.93e-01 | 94.6% | 67.6% |
| 3767492 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.52 | 43.0 | 3.15e-01 | 93.2% | 77.2% |
| 2028017 | 881.6.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › FrpD › FrpD › FrpC | 0.52 | 43.0 | 3.13e-01 | 94.6% | 32.6% |
| 3783515 | 222.1.1.3 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl_CoA_thio | 0.52 | 41.0 | 3.19e-01 | 87.8% | 76.2% |
| 5035335 | 298.1.1.42 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA | 0.50 | 43.0 | 2.78e-01 | 100.0% | 41.8% |
| 3971082 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.50 | 44.0 | 3.65e-01 | 100.0% | 75.6% |