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JX120799.2__AFN39986.1__LP030nr2_048__00048

Bact-Vir

JX120799.2__AFN39986.1__LP030nr2_048__00048

Identity

Accession:
JX120799 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Psavirus› Listeria_phage_LP-030-2

TaxID: 1173743

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-69
PDB
Domain cluster: rep: NC_025440.1__YP_010843649.1__PI27_gp082__00082__D17-70
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r77A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 35.0 2.97e-01 91.2% 34.3%
2drpA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.55 28.0 3.29e-01 98.2% 64.7%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 35.0 2.93e-01 100.0% 35.5%
2zuvA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.50 38.0 2.53e-01 91.2% 98.4%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3207530 314.1.1.22 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › zf-TFIIIC 0.52 28.0 2.84e-01 96.5% 47.3%