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JX181824.1__AFU63698.1__X__00057

Bact-Vir

JX181824.1__AFU63698.1__X__00057

Identity

Accession:
JX181824 ↗
Kingdom:
phage

Quality

92.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Seunavirus› Salmonella_phage_SSE121

TaxID: 1204529

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-60
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 53.0 4.67e-01 100.0% 55.3%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 56.0 5.73e-01 100.0% 94.3%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.25e-01 100.0% 80.0%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 56.0 5.20e-01 100.0% 89.2%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 4.99e-01 100.0% 67.5%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 57.0 5.61e-01 100.0% 93.4%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 56.0 5.47e-01 100.0% 88.9%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 54.0 4.80e-01 100.0% 64.3%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 56.0 5.45e-01 100.0% 93.4%
4v19I01 3.40.5.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › Ribosomal protein L9, N-terminal domain 0.63 41.0 4.15e-01 100.0% 66.7%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.77e-01 100.0% 83.9%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 46.0 4.87e-01 100.0% 95.7%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 54.0 4.95e-01 100.0% 76.0%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 54.0 5.11e-01 100.0% 91.0%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 46.0 4.45e-01 100.0% 73.0%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 53.0 5.16e-01 100.0% 90.3%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 4.85e-01 100.0% 79.4%
2wg5F02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 42.0 4.17e-01 73.2% 94.8%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 5.00e-01 100.0% 90.0%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 52.0 5.17e-01 100.0% 98.3%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 51.0 5.08e-01 100.0% 94.9%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 43.0 4.52e-01 100.0% 93.9%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 49.0 4.39e-01 100.0% 66.3%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 3.82e-01 96.4% 49.0%
2awnC02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.58 41.0 3.78e-01 76.8% 85.9%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.31e-01 100.0% 90.6%
2hgaA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.56 48.0 4.28e-01 100.0% 96.5%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 46.0 4.36e-01 98.2% 80.0%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.51 36.0 3.72e-01 76.8% 100.0%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.51 36.0 3.72e-01 76.8% 100.0%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 37.0 3.39e-01 87.5% 59.0%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3614414 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.06e-01 100.0% 77.6%
3774821 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 55.0 5.46e-01 100.0% 85.0%
3629145 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 60.0 5.78e-01 100.0% 87.7%
3939408 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.75e-01 100.0% 87.7%
3790978 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.57e-01 100.0% 81.4%
3261986 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 57.0 5.66e-01 100.0% 91.5%
3263489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.52e-01 100.0% 84.6%
3323533 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.66 56.0 5.44e-01 100.0% 86.2%
3275623 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 58.0 5.02e-01 100.0% 65.9%
3498145 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 56.0 5.42e-01 100.0% 85.9%
3554994 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 57.0 4.89e-01 100.0% 62.9%
3256431 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.64 46.0 4.21e-01 98.2% 55.0%
3702915 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 56.0 5.52e-01 100.0% 91.7%
4218142 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.64 47.0 3.96e-01 100.0% 45.0%
3714141 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.64 54.0 4.15e-01 100.0% 67.9%
3659579 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 54.0 4.96e-01 100.0% 72.0%
3415045 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 55.0 5.14e-01 100.0% 78.6%
3895018 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.64 55.0 5.30e-01 100.0% 95.4%
3494765 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.64 55.0 3.68e-01 100.0% 25.0%
3600486 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.57e-01 100.0% 55.0%
3323551 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.63 55.0 5.26e-01 100.0% 86.2%
4038705 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.63 55.0 5.32e-01 100.0% 95.4%
5038405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 44.0 4.69e-01 100.0% 91.1%
3621642 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 54.0 4.88e-01 100.0% 68.8%
3370388 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.63 54.0 5.22e-01 100.0% 86.2%
3556321 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.63 54.0 4.89e-01 100.0% 80.0%
3267345 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.63 46.0 4.65e-01 100.0% 81.8%
3480491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.96e-01 100.0% 74.7%
3170649 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 55.0 4.81e-01 100.0% 84.7%
3501574 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.62 53.0 4.91e-01 100.0% 85.3%
3533318 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.62 45.0 4.66e-01 100.0% 90.0%
3593607 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 5.06e-01 100.0% 94.5%
3816553 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.62 43.0 4.40e-01 96.4% 78.2%
3200493 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.61 44.0 4.48e-01 98.2% 81.8%
3989485 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.61 47.0 4.87e-01 100.0% 98.0%
3881192 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 3.70e-01 100.0% 31.8%
3240192 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 53.0 4.83e-01 100.0% 74.7%
4014906 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 43.0 3.94e-01 96.4% 55.0%
2561577 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.61 44.0 4.38e-01 100.0% 75.4%
4953223 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.61 45.0 4.71e-01 100.0% 94.0%
5022448 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.74e-01 100.0% 85.3%
279006 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 52.0 4.88e-01 100.0% 82.6%
3592332 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.19e-01 100.0% 63.8%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.37e-01 100.0% 90.0%
3441677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 44.0 4.52e-01 100.0% 100.0%
3793656 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.56 46.0 3.54e-01 100.0% 37.2%
4870495 304.169.1.1 ↗ a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WYL 0.56 46.0 3.86e-01 100.0% 53.7%
3505725 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 42.0 4.29e-01 100.0% 87.3%
3831339 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.55 44.0 2.92e-01 100.0% 20.0%