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JX181825.1__AFU63910.1__X__00027
Bact-VirJX181825.1__AFU63910.1__X__00027
Identity
- Accession:
- JX181825 ↗
- Kingdom:
- phage
Quality
81.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Gelderlandvirus›
Salmonella_phage_STML-198
TaxID: 1204531
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-87_92-102
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.68 | 49.0 | 4.95e-01 | 76.1% | 94.6% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.64 | 47.0 | 4.24e-01 | 77.2% | 72.2% |
| 3zheA02 | 1.25.40.760 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 49.0 | 3.78e-01 | 84.8% | 89.9% |
| 2rkkA01 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.62 | 45.0 | 3.83e-01 | 78.3% | 58.3% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 38.0 | 4.05e-01 | 72.8% | 80.8% |
| 4g1tA03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 46.0 | 3.39e-01 | 100.0% | 70.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.68 | 49.0 | 4.95e-01 | 76.1% | 94.6% |
| 4017163 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 46.0 | 3.81e-01 | 73.9% | 95.9% |
| 3800231 | 626.1.1.1 ↗ | alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 | 0.64 | 48.0 | 3.13e-01 | 81.5% | 58.6% |
| 1679097 | 109.4.1.81 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF-3c_N | 0.62 | 54.0 | 3.34e-01 | 96.7% | 44.2% |
| 4035726 | 109.4.1.144 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ints3_N | 0.61 | 46.0 | 3.27e-01 | 80.4% | 50.0% |
| 4030366 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 53.0 | 3.09e-01 | 100.0% | 44.2% |
| 4014261 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 3.19e-01 | 84.8% | 48.3% |
| 3879123 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 49.0 | 3.15e-01 | 92.4% | 65.5% |
| 3589128 | 109.4.1.275 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rgg_C | 0.60 | 51.0 | 3.88e-01 | 93.5% | 74.0% |
| 3272997 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 44.0 | 3.54e-01 | 81.5% | 88.7% |
| 3282593 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.59 | 41.0 | 3.05e-01 | 71.7% | 62.5% |
| 3829016 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.59 | 40.0 | 3.64e-01 | 70.7% | 72.0% |
| 3243627 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.58 | 48.0 | 2.95e-01 | 93.5% | 44.3% |
| 3995094 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.58 | 39.0 | 3.66e-01 | 70.7% | 56.4% |
| 3710642 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 38.0 | 3.10e-01 | 71.7% | 60.0% |
| 3692481 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 49.0 | 3.58e-01 | 100.0% | 83.8% |
| 3600807 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 37.0 | 3.15e-01 | 71.7% | 69.7% |
| 4409479 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.53 | 39.0 | 3.72e-01 | 81.5% | 85.2% |
| 3930124 | 109.25.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN | 0.52 | 37.0 | 3.40e-01 | 77.2% | 71.5% |