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JX182372.1__AFU62217.1__TG1_22__00022
Bact-VirJX182372.1__AFU62217.1__TG1_22__00022
Identity
- Accession:
- JX182372 ↗
- Kingdom:
- phage
Quality
71.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Colingsworthviridae›
Tigunavirus›
Streptomyces_phage_TG1
TaxID: 2927987
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 264-333
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 51.0 | 4.23e-01 | 91.4% | 87.7% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 48.0 | 4.44e-01 | 91.4% | 75.0% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.58 | 40.0 | 4.35e-01 | 72.9% | 100.0% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 46.0 | 4.29e-01 | 91.4% | 85.6% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.57 | 41.0 | 3.58e-01 | 77.1% | 61.5% |
| 3npfA03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.55 | 39.0 | 3.08e-01 | 77.1% | 68.3% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 3.81e-01 | 74.3% | 72.6% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4391878 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.62 | 42.0 | 3.33e-01 | 71.4% | 56.8% |
| 3576940 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 47.0 | 3.38e-01 | 90.0% | 40.4% |
| 3620094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 4.31e-01 | 71.4% | 94.5% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.58 | 39.0 | 3.91e-01 | 71.4% | 69.3% |
| 3616243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 39.0 | 4.22e-01 | 70.0% | 90.9% |
| 3907619 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 42.0 | 3.98e-01 | 78.6% | 68.2% |
| 3881192 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 45.0 | 3.52e-01 | 88.6% | 72.4% |
| 4932493 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 4.03e-01 | 72.9% | 92.3% |
| 3625264 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 45.0 | 4.18e-01 | 91.4% | 91.6% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.57 | 39.0 | 3.91e-01 | 71.4% | 80.0% |
| 3795384 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 45.0 | 3.30e-01 | 91.4% | 40.5% |
| 3389169 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 42.0 | 3.98e-01 | 81.4% | 69.4% |
| 3795121 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.56 | 39.0 | 4.04e-01 | 74.3% | 86.2% |
| 3492982 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.56 | 46.0 | 3.87e-01 | 97.1% | 66.7% |
| 3712782 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 38.0 | 3.71e-01 | 72.9% | 70.0% |
| 3498280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 46.0 | 3.88e-01 | 97.1% | 69.2% |
| 5034040 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 37.0 | 4.02e-01 | 91.4% | 90.9% |
| 3768094 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 44.0 | 3.96e-01 | 91.4% | 95.2% |
| 4960108 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 35.0 | 3.49e-01 | 94.3% | 61.3% |
| 3660923 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 38.0 | 3.87e-01 | 75.7% | 75.7% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.54 | 36.0 | 3.74e-01 | 70.0% | 81.5% |
| 3703934 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 38.0 | 3.99e-01 | 74.3% | 91.7% |
| 3712219 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.54 | 36.0 | 3.74e-01 | 70.0% | 84.6% |
| 3576128 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 45.0 | 3.97e-01 | 100.0% | 94.8% |
| 3486327 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 38.0 | 4.07e-01 | 77.1% | 90.0% |
| 3941004 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 36.0 | 3.50e-01 | 70.0% | 75.0% |
| 3617111 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 40.0 | 3.75e-01 | 82.9% | 65.6% |
| 3934628 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 40.0 | 3.76e-01 | 84.3% | 68.9% |
| 4559371 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 3.87e-01 | 88.6% | 85.7% |
| 3766673 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 3.26e-01 | 71.4% | 100.0% |
| 3373330 | 4.1.1.337 ↗ | beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II | 0.52 | 39.0 | 3.88e-01 | 85.7% | 78.7% |
| 4044896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 39.0 | 3.86e-01 | 87.1% | 86.7% |
| 3278337 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.51 | 39.0 | 2.97e-01 | 88.6% | 71.3% |
D2
high
residues 390-455
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25746.2 best | Phage_Repressor_c | 64.2 | 1.90e-17 | 100.0% | 17.2% |
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.85 | 58.0 | 4.87e-01 | 71.2% | 46.7% |
| 2ra1A01 | 1.20.58.790 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 71.0 | 6.20e-01 | 97.0% | 92.9% |
| 1ugoA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.79 | 70.0 | 6.15e-01 | 100.0% | 78.8% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.79 | 70.0 | 6.20e-01 | 100.0% | 96.8% |
| 7smtA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.79 | 69.0 | 5.11e-01 | 100.0% | 47.1% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.78 | 69.0 | 6.29e-01 | 100.0% | 85.4% |
| 3axjB01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.77 | 70.0 | 5.26e-01 | 100.0% | 56.8% |
| 2qvaA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.77 | 70.0 | 5.55e-01 | 100.0% | 65.1% |
| 4lixA03 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.77 | 69.0 | 4.65e-01 | 100.0% | 28.8% |
| 5bqnA02 | 1.20.1120.10 | Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" | 0.75 | 66.0 | 4.13e-01 | 100.0% | 51.0% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 60.0 | 5.18e-01 | 89.4% | 100.0% |
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.74 | 66.0 | 5.15e-01 | 98.5% | 68.6% |
| 2xokP00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.73 | 50.0 | 4.81e-01 | 71.2% | 64.9% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 61.0 | 6.11e-01 | 90.9% | 98.5% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 63.0 | 5.45e-01 | 100.0% | 99.1% |
| 4e6hA00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.72 | 61.0 | 3.55e-01 | 100.0% | 11.2% |
| 1nfvA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 62.0 | 4.70e-01 | 100.0% | 77.5% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.72 | 61.0 | 5.41e-01 | 100.0% | 86.3% |
| 1zu2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 59.0 | 4.52e-01 | 97.0% | 39.2% |
| 2kmfA01 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.70 | 59.0 | 5.22e-01 | 98.5% | 75.5% |
| 1lwbA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.70 | 58.0 | 4.80e-01 | 93.9% | 55.7% |
| 3eslA01 | 1.20.58.2070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 59.0 | 5.73e-01 | 100.0% | 88.0% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.70 | 59.0 | 5.19e-01 | 98.5% | 68.0% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 57.0 | 4.84e-01 | 90.9% | 74.1% |
| 2chpA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.69 | 60.0 | 4.63e-01 | 97.0% | 93.9% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 47.0 | 4.40e-01 | 71.2% | 66.3% |
| 5figA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.69 | 57.0 | 5.05e-01 | 95.5% | 80.0% |
| 1ldjA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.69 | 58.0 | 4.95e-01 | 98.5% | 92.2% |
| 5x56B00 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.69 | 59.0 | 5.11e-01 | 98.5% | 74.3% |
| 2yjkC00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 59.0 | 4.54e-01 | 100.0% | 89.2% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 56.0 | 5.77e-01 | 100.0% | 100.0% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 57.0 | 4.52e-01 | 100.0% | 93.3% |
| 2qr4A01 | 1.20.140.70 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain | 0.68 | 57.0 | 4.48e-01 | 100.0% | 56.4% |
| 4gpkB01 | 1.25.40.1000 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 53.0 | 4.71e-01 | 93.9% | 58.6% |
| 7dswA01 | 1.20.1530.20 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › | 0.67 | 59.0 | 3.61e-01 | 100.0% | 67.9% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.67 | 56.0 | 5.26e-01 | 100.0% | 94.3% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 57.0 | 5.00e-01 | 100.0% | 95.2% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.66 | 57.0 | 4.53e-01 | 98.5% | 90.7% |
| 3anwB00 | 1.20.58.2050 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 55.0 | 4.23e-01 | 97.0% | 43.8% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.65 | 56.0 | 4.29e-01 | 100.0% | 81.6% |
| 2wy4A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 55.0 | 4.41e-01 | 98.5% | 88.5% |
| 2lsgA00 | 1.20.58.1280 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DNA repair protein Rev1, C-terminal domain | 0.64 | 54.0 | 4.87e-01 | 98.5% | 73.2% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.64 | 55.0 | 4.69e-01 | 98.5% | 98.2% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.64 | 54.0 | 4.38e-01 | 97.0% | 64.7% |
| 1htjF00 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.64 | 54.0 | 3.93e-01 | 93.9% | 84.6% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.63 | 52.0 | 4.32e-01 | 93.9% | 56.5% |
| 5hayA02 | 1.25.40.440 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain | 0.63 | 48.0 | 4.60e-01 | 97.0% | 72.2% |
| 1umnG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 48.0 | 3.79e-01 | 92.4% | 81.2% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.62 | 52.0 | 4.22e-01 | 97.0% | 50.4% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 42.0 | 4.13e-01 | 72.7% | 68.5% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 52.0 | 4.60e-01 | 98.5% | 64.7% |
| 2lseA00 | 1.20.120.1360 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.61 | 49.0 | 4.40e-01 | 97.0% | 61.4% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.60 | 45.0 | 4.80e-01 | 84.8% | 96.5% |
| 6wk3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 43.0 | 3.43e-01 | 90.9% | 57.9% |
| 3jsbA01 | 1.20.1440.300 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain | 0.51 | 41.0 | 3.95e-01 | 93.9% | 76.5% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3669782 | 604.22.1.0 ↗ | alpha bundles › Spectrin repeat-like › tubulin binding cofactor C N-terminal domain › tubulin binding cofactor C N-terminal domain | 0.84 | 76.0 | 7.31e-01 | 100.0% | 90.7% |
| 3519972 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.82 | 56.0 | 5.03e-01 | 71.2% | 65.6% |
| 3259976 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.82 | 74.0 | 4.95e-01 | 100.0% | 46.7% |
| 3391259 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.81 | 72.0 | 6.49e-01 | 100.0% | 84.4% |
| 4080313 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.81 | 71.0 | 5.57e-01 | 100.0% | 87.9% |
| 3704321 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.80 | 71.0 | 6.48e-01 | 97.0% | 83.5% |
| 3700672 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.80 | 65.0 | 5.38e-01 | 87.9% | 84.3% |
| 3580280 | 604.1.1.192 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26998 | 0.79 | 70.0 | 6.23e-01 | 100.0% | 89.5% |
| 3307044 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.78 | 69.0 | 5.96e-01 | 100.0% | 82.9% |
| 3992590 | 603.1.1.110 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF26585 | 0.78 | 68.0 | 5.99e-01 | 98.5% | 94.0% |
| 3314530 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.77 | 69.0 | 6.00e-01 | 100.0% | 80.0% |
| 3591222 | 604.1.1.198 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › BAG | 0.76 | 67.0 | 5.96e-01 | 100.0% | 88.4% |
| 3274773 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.76 | 66.0 | 4.56e-01 | 98.5% | 35.6% |
| 4169956 | 604.12.1.26 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › HemX | 0.76 | 68.0 | 6.49e-01 | 100.0% | 85.3% |
| 4982222 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.76 | 66.0 | 6.12e-01 | 98.5% | 88.2% |
| 3938941 | 109.4.1.649 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4807 | 0.75 | 67.0 | 5.35e-01 | 100.0% | 83.8% |
| 4974234 | 604.12.1.141 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › 8xMP | 0.75 | 65.0 | 6.01e-01 | 97.0% | 88.2% |
| 3589541 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.75 | 65.0 | 4.71e-01 | 98.5% | 79.5% |
| 3604847 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 63.0 | 4.74e-01 | 95.5% | 46.7% |
| 3785891 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 63.0 | 4.55e-01 | 97.0% | 34.9% |
| 3217251 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 64.0 | 4.63e-01 | 100.0% | 34.7% |
| 3239393 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.72 | 61.0 | 5.22e-01 | 97.0% | 83.6% |
| 2035519 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.71 | 62.0 | 5.15e-01 | 100.0% | 79.0% |
| 3192246 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.70 | 59.0 | 4.59e-01 | 95.5% | 81.3% |
| 3620341 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 60.0 | 5.14e-01 | 98.5% | 60.0% |
| 3730474 | 6132.1.1.0 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain | 0.70 | 57.0 | 4.49e-01 | 90.9% | 52.9% |
| 1692482 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.69 | 58.0 | 5.39e-01 | 93.9% | 78.3% |
| 3183435 | 109.4.1.1126 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_SYO1 | 0.69 | 59.0 | 4.01e-01 | 97.0% | 30.6% |
| 4028151 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.68 | 59.0 | 5.29e-01 | 100.0% | 87.4% |
| 3925617 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.68 | 49.0 | 4.55e-01 | 77.3% | 95.3% |
| 3838379 | 601.53.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellin glycosyltransferase Maf helical bundle domain › Flagellin glycosyltransferase Maf helical bundle domain | 0.68 | 59.0 | 5.03e-01 | 100.0% | 60.0% |
| 3184336 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.68 | 58.0 | 4.52e-01 | 100.0% | 76.1% |
| 3870846 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.67 | 57.0 | 3.73e-01 | 100.0% | 47.8% |
| 4398486 | 109.4.1.451 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Iml2-TPR_39 | 0.67 | 56.0 | 3.51e-01 | 95.5% | 19.0% |
| 4965788 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.67 | 56.0 | 4.49e-01 | 97.0% | 98.6% |
| 2503462 | 601.33.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD | 0.67 | 57.0 | 5.08e-01 | 95.5% | 73.4% |
| 3730713 | 109.4.1.194 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 | 0.66 | 56.0 | 4.87e-01 | 100.0% | 61.8% |
| 5045531 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 54.0 | 5.12e-01 | 98.5% | 88.2% |
| 3605559 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.65 | 55.0 | 4.77e-01 | 100.0% | 98.2% |
| 3346760 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.65 | 55.0 | 4.48e-01 | 100.0% | 52.6% |
| 3602354 | 1030.1.1.1 ↗ | alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Csm2_III-A | 0.65 | 55.0 | 4.66e-01 | 100.0% | 58.3% |
| 3277060 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.64 | 48.0 | 4.62e-01 | 87.9% | 69.3% |
| 3249014 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.64 | 48.0 | 4.99e-01 | 87.9% | 86.7% |
| 3273958 | 198.1.1.10 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin | 0.63 | 46.0 | 4.29e-01 | 87.9% | 61.2% |
| 4498171 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.63 | 52.0 | 5.00e-01 | 92.4% | 85.3% |
| 4123602 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.62 | 54.0 | 4.91e-01 | 98.5% | 83.3% |
| 4401833 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.62 | 51.0 | 4.52e-01 | 93.9% | 77.0% |
| 3955107 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.62 | 53.0 | 4.14e-01 | 100.0% | 92.3% |
| 2073547 | 621.1.1.2 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 | 0.61 | 47.0 | 4.80e-01 | 98.5% | 90.8% |
| 3252439 | 198.1.1.10 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin | 0.60 | 47.0 | 4.43e-01 | 87.9% | 68.8% |
| 3702979 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.60 | 50.0 | 3.14e-01 | 100.0% | 52.9% |
| 4528425 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.59 | 51.0 | 4.54e-01 | 100.0% | 81.0% |
| 4592728 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.59 | 49.0 | 4.52e-01 | 98.5% | 90.0% |
| 4070498 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.59 | 49.0 | 4.46e-01 | 93.9% | 85.6% |
| 4630984 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.57 | 49.0 | 4.59e-01 | 98.5% | 90.6% |
| 3249906 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.55 | 45.0 | 4.16e-01 | 92.4% | 78.8% |
D3
high
residues 634-691
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25746.2 best | Phage_Repressor_c | 61.9 | 9.20e-17 | 100.0% | 15.0% |
CATH (84)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rx6A00 | 1.20.58.1090 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer | 0.91 | 81.0 | 5.47e-01 | 94.8% | 81.8% |
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.90 | 71.0 | 6.72e-01 | 84.5% | 76.5% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.89 | 72.0 | 7.82e-01 | 86.2% | 100.0% |
| 3kr9A02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.88 | 67.0 | 6.58e-01 | 84.5% | 75.4% |
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.88 | 74.0 | 6.47e-01 | 91.4% | 62.7% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.88 | 75.0 | 6.57e-01 | 91.4% | 65.4% |
| 1blwC00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.87 | 71.0 | 5.22e-01 | 87.9% | 36.2% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.87 | 72.0 | 4.93e-01 | 89.7% | 90.2% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.86 | 62.0 | 4.42e-01 | 79.3% | 27.8% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.86 | 73.0 | 6.26e-01 | 91.4% | 63.6% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.86 | 79.0 | 6.00e-01 | 100.0% | 54.0% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.86 | 73.0 | 6.44e-01 | 91.4% | 66.7% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.85 | 74.0 | 5.71e-01 | 91.4% | 92.2% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 71.0 | 5.95e-01 | 91.4% | 65.6% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.84 | 73.0 | 6.47e-01 | 91.4% | 69.2% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.84 | 72.0 | 4.85e-01 | 93.1% | 26.9% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.84 | 69.0 | 6.45e-01 | 89.7% | 80.3% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 66.0 | 6.73e-01 | 84.5% | 91.2% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.83 | 69.0 | 6.88e-01 | 91.4% | 93.3% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.83 | 70.0 | 4.66e-01 | 91.4% | 44.6% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.83 | 69.0 | 4.42e-01 | 91.4% | 20.2% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 70.0 | 6.79e-01 | 89.7% | 87.3% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.83 | 70.0 | 5.97e-01 | 91.4% | 63.3% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.83 | 69.0 | 4.26e-01 | 91.4% | 17.2% |
| 3craA02 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.82 | 65.0 | 4.96e-01 | 89.7% | 39.1% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 73.0 | 5.71e-01 | 100.0% | 80.0% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.81 | 72.0 | 5.69e-01 | 94.8% | 76.4% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.81 | 63.0 | 6.12e-01 | 84.5% | 83.1% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.81 | 66.0 | 5.14e-01 | 87.9% | 47.0% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.80 | 67.0 | 6.22e-01 | 91.4% | 74.0% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 67.0 | 5.47e-01 | 93.1% | 51.0% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.80 | 67.0 | 4.85e-01 | 93.1% | 44.7% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.79 | 71.0 | 6.05e-01 | 100.0% | 79.6% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.78 | 60.0 | 4.37e-01 | 82.8% | 99.3% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.77 | 69.0 | 5.72e-01 | 100.0% | 80.4% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.77 | 58.0 | 5.06e-01 | 91.4% | 54.0% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.77 | 64.0 | 5.60e-01 | 91.4% | 64.7% |
| 7ep1B01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.77 | 64.0 | 4.16e-01 | 93.1% | 21.9% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 61.0 | 5.61e-01 | 87.9% | 67.6% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.76 | 68.0 | 5.43e-01 | 100.0% | 92.2% |
| 4dyqA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 62.0 | 5.05e-01 | 94.8% | 49.5% |
| 2qgaB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.76 | 56.0 | 4.47e-01 | 79.3% | 44.7% |
| 3tufA00 | 1.10.287.4300 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like | 0.75 | 59.0 | 4.73e-01 | 86.2% | 48.7% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.75 | 62.0 | 5.65e-01 | 91.4% | 92.2% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.74 | 59.0 | 4.54e-01 | 86.2% | 73.0% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 59.0 | 5.80e-01 | 89.7% | 91.9% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 59.0 | 5.18e-01 | 91.4% | 60.9% |
| 8b9zK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.73 | 56.0 | 4.83e-01 | 89.7% | 52.7% |
| 1tfkB00 | 1.20.120.650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D | 0.73 | 51.0 | 4.52e-01 | 74.1% | 53.5% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 58.0 | 5.80e-01 | 91.4% | 89.8% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.72 | 57.0 | 4.78e-01 | 91.4% | 66.4% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.72 | 67.0 | 4.81e-01 | 100.0% | 94.7% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.72 | 56.0 | 4.60e-01 | 86.2% | 46.8% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.71 | 55.0 | 4.39e-01 | 82.8% | 45.0% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.71 | 56.0 | 4.61e-01 | 91.4% | 47.3% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 55.0 | 5.59e-01 | 89.7% | 94.8% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.70 | 56.0 | 5.25e-01 | 91.4% | 89.3% |
| 4rg8A04 | 1.10.287.1240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 54.0 | 5.32e-01 | 86.2% | 91.9% |
| 3itfA00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.70 | 54.0 | 4.39e-01 | 87.9% | 44.1% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.70 | 58.0 | 4.86e-01 | 100.0% | 69.6% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 60.0 | 5.00e-01 | 100.0% | 66.0% |
| 5aj3N01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 53.0 | 4.65e-01 | 94.8% | 54.9% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 54.0 | 5.46e-01 | 89.7% | 92.9% |
| 2db7A01 | 6.10.250.980 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 52.0 | 5.43e-01 | 84.5% | 96.2% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 53.0 | 3.25e-01 | 82.8% | 27.0% |
| 3uarA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.68 | 60.0 | 4.93e-01 | 100.0% | 91.6% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 54.0 | 4.03e-01 | 91.4% | 33.3% |
| 3jcuZ00 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.68 | 53.0 | 5.31e-01 | 91.4% | 86.9% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.68 | 53.0 | 5.33e-01 | 91.4% | 93.1% |
| 1f2eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.67 | 57.0 | 4.76e-01 | 100.0% | 68.9% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 57.0 | 4.76e-01 | 100.0% | 82.1% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 51.0 | 4.48e-01 | 89.7% | 57.9% |
| 1n2aA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 55.0 | 4.67e-01 | 100.0% | 67.9% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 45.0 | 4.33e-01 | 72.4% | 67.2% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 53.0 | 3.85e-01 | 98.3% | 32.8% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.64 | 51.0 | 4.69e-01 | 91.4% | 66.3% |
| 4hojA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 56.0 | 4.68e-01 | 100.0% | 66.0% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.63 | 50.0 | 4.98e-01 | 91.4% | 90.2% |
| 4finB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 52.0 | 3.36e-01 | 96.6% | 23.9% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 48.0 | 4.67e-01 | 86.2% | 76.9% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.62 | 47.0 | 4.45e-01 | 91.4% | 72.7% |
| 3no6A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.61 | 50.0 | 3.41e-01 | 96.6% | 25.5% |
| 1s5jA04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.61 | 47.0 | 4.64e-01 | 89.7% | 82.0% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 53.0 | 4.95e-01 | 100.0% | 84.9% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3654589 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.95 | 81.0 | 6.80e-01 | 89.7% | 60.0% |
| 3385727 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.93 | 81.0 | 5.02e-01 | 91.4% | 19.6% |
| 4032379 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.92 | 80.0 | 7.19e-01 | 91.4% | 70.7% |
| 3890044 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.92 | 80.0 | 7.52e-01 | 91.4% | 77.9% |
| 4569741 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.92 | 79.0 | 6.11e-01 | 91.4% | 46.1% |
| 4034201 | 192.7.1.1 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB | 0.92 | 77.0 | 7.63e-01 | 87.9% | 90.0% |
| 4378877 | 3711.1.1.20 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF444 | 0.91 | 76.0 | 6.90e-01 | 87.9% | 68.0% |
| 3205582 | 605.8.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › PF27894 | 0.91 | 74.0 | 7.08e-01 | 84.5% | 75.4% |
| 4574972 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.91 | 74.0 | 7.33e-01 | 84.5% | 86.7% |
| 4940281 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.91 | 80.0 | 7.62e-01 | 91.4% | 81.5% |
| 5079993 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.91 | 71.0 | 6.38e-01 | 81.0% | 62.7% |
| 3408508 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.91 | 79.0 | 6.92e-01 | 91.4% | 66.3% |
| 3917579 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.91 | 79.0 | 4.69e-01 | 91.4% | 14.9% |
| 4030523 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.91 | 79.0 | 5.11e-01 | 91.4% | 26.0% |
| 3248119 | 109.4.1.1207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TmcB | 0.91 | 86.0 | 6.42e-01 | 100.0% | 60.0% |
| 3502849 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.91 | 78.0 | 5.95e-01 | 91.4% | 44.2% |
| 3720652 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.90 | 78.0 | 4.89e-01 | 91.4% | 20.8% |
| 3909017 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.90 | 78.0 | 6.56e-01 | 91.4% | 58.9% |
| 3497347 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.90 | 77.0 | 5.83e-01 | 91.4% | 42.4% |
| 3942662 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.90 | 77.0 | 6.39e-01 | 91.4% | 55.8% |
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.90 | 77.0 | 6.65e-01 | 91.4% | 65.9% |
| 4608200 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.89 | 83.0 | 6.23e-01 | 98.3% | 84.0% |
| 3607086 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.89 | 77.0 | 6.79e-01 | 91.4% | 70.0% |
| 3456370 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.89 | 77.0 | 5.44e-01 | 91.4% | 38.7% |
| 3251093 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.89 | 77.0 | 5.95e-01 | 91.4% | 48.7% |
| 3905660 | 603.1.1.164 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SERTA | 0.89 | 82.0 | 7.90e-01 | 100.0% | 96.9% |
| 4945538 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.89 | 76.0 | 7.11e-01 | 91.4% | 75.7% |
| 3631825 | 109.4.1.1407 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA | 0.89 | 82.0 | 4.34e-01 | 96.6% | 8.3% |
| 3170172 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.89 | 76.0 | 4.80e-01 | 91.4% | 21.2% |
| 3477880 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.88 | 75.0 | 4.65e-01 | 91.4% | 18.3% |
| 3719637 | 192.12.1.0 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM | 0.88 | 75.0 | 6.36e-01 | 91.4% | 58.9% |
| 3790121 | 603.1.1.114 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HR1 | 0.88 | 82.0 | 6.67e-01 | 100.0% | 83.0% |
| 3730423 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.88 | 76.0 | 4.58e-01 | 91.4% | 16.6% |
| 4156067 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.88 | 82.0 | 6.44e-01 | 100.0% | 75.5% |
| 3505608 | 192.29.1.1 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom | 0.88 | 76.0 | 6.86e-01 | 91.4% | 70.7% |
| 4634395 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.88 | 70.0 | 5.61e-01 | 91.4% | 46.7% |
| 4453815 | 192.12.1.1 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › Prok-TraM | 0.88 | 75.0 | 6.20e-01 | 91.4% | 55.8% |
| 4096596 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.88 | 75.0 | 4.31e-01 | 91.4% | 11.5% |
| 4000262 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.87 | 80.0 | 6.78e-01 | 98.3% | 90.0% |
| 3939680 | 4177.1.1.3 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Arfaptin | 0.87 | 74.0 | 4.77e-01 | 91.4% | 22.6% |
| 3558280 | 603.1.1.114 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HR1 | 0.87 | 81.0 | 6.73e-01 | 100.0% | 87.4% |
| 3235839 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.87 | 74.0 | 5.11e-01 | 91.4% | 30.3% |
| 3718462 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.87 | 74.0 | 6.15e-01 | 91.4% | 55.8% |
| 3983042 | 3711.1.1.3 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › Metal_resist | 0.87 | 73.0 | 6.19e-01 | 89.7% | 58.9% |
| 3254000 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.87 | 74.0 | 4.65e-01 | 91.4% | 20.4% |
| 3170491 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.87 | 74.0 | 4.83e-01 | 91.4% | 24.1% |
| 3695842 | 109.4.1.1407 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA | 0.87 | 81.0 | 4.28e-01 | 98.3% | 7.8% |
| 3577907 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.86 | 73.0 | 4.64e-01 | 91.4% | 20.8% |
| 5018554 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.86 | 73.0 | 6.00e-01 | 91.4% | 56.0% |
| 3743885 | 109.4.1.1407 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA | 0.86 | 81.0 | 4.36e-01 | 100.0% | 11.1% |
| 4453591 | 3602.1.1.4 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › RRP36 | 0.86 | 73.0 | 5.38e-01 | 89.7% | 41.5% |
| 3631342 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.86 | 74.0 | 5.90e-01 | 91.4% | 57.1% |
| 4045132 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.86 | 71.0 | 5.63e-01 | 87.9% | 95.5% |
| 3810882 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.86 | 65.0 | 4.05e-01 | 91.4% | 16.7% |
| 3267886 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.86 | 73.0 | 4.60e-01 | 91.4% | 20.4% |
| 4324117 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.86 | 74.0 | 4.41e-01 | 91.4% | 15.1% |
| 3711125 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.86 | 73.0 | 4.85e-01 | 91.4% | 25.9% |
| 3268765 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.86 | 74.0 | 4.75e-01 | 93.1% | 22.5% |
| 3232199 | 4177.1.1.10 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH | 0.86 | 72.0 | 4.56e-01 | 91.4% | 19.6% |
| 3713312 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.86 | 73.0 | 4.81e-01 | 91.4% | 25.2% |
| 3239510 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.86 | 78.0 | 6.50e-01 | 98.3% | 85.3% |
| 4132296 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.85 | 72.0 | 7.18e-01 | 91.4% | 90.0% |
| 4090348 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.85 | 80.0 | 5.00e-01 | 100.0% | 31.9% |
| 3697264 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.85 | 78.0 | 5.19e-01 | 100.0% | 36.4% |
| 3255232 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.85 | 71.0 | 4.56e-01 | 91.4% | 21.2% |
| 2507423 | 632.2.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › FIVAR | 0.85 | 70.0 | 6.29e-01 | 89.7% | 66.7% |
| 3213281 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.85 | 71.0 | 4.47e-01 | 91.4% | 19.6% |
| 4317199 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.85 | 79.0 | 5.96e-01 | 100.0% | 72.0% |
| 4175269 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.84 | 71.0 | 4.11e-01 | 91.4% | 11.7% |
| 3189247 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.84 | 71.0 | 4.60e-01 | 91.4% | 22.6% |
| 3762595 | 604.7.1.13 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › HR1 | 0.84 | 76.0 | 6.45e-01 | 98.3% | 87.8% |
| 3213527 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.83 | 70.0 | 4.36e-01 | 91.4% | 18.6% |
| 3576467 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.83 | 69.0 | 4.29e-01 | 91.4% | 17.4% |
| 3488978 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.83 | 69.0 | 4.32e-01 | 91.4% | 18.3% |
| 3619662 | 192.12.1.3 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › DUF747 | 0.83 | 69.0 | 6.19e-01 | 91.4% | 66.3% |
| 3908810 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.83 | 69.0 | 4.30e-01 | 91.4% | 18.0% |
| 3737161 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.83 | 68.0 | 5.45e-01 | 89.7% | 55.5% |
| 3939668 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.82 | 68.0 | 4.52e-01 | 91.4% | 25.9% |
| 3594129 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.81 | 70.0 | 4.63e-01 | 93.1% | 26.5% |
| 3271303 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.81 | 67.0 | 4.30e-01 | 91.4% | 20.4% |
| 5030987 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.81 | 74.0 | 6.59e-01 | 100.0% | 93.8% |
| 3750777 | 150.3.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Hormone_1 | 0.80 | 66.0 | 4.82e-01 | 91.4% | 34.8% |
| 4649114 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.80 | 67.0 | 5.52e-01 | 91.4% | 60.0% |
| 4156290 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.78 | 56.0 | 6.12e-01 | 81.0% | 100.0% |
| 2914508 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.77 | 68.0 | 4.27e-01 | 96.6% | 19.7% |
| 3251379 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.77 | 62.0 | 5.47e-01 | 89.7% | 82.4% |
| 3339561 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.75 | 61.0 | 5.13e-01 | 91.4% | 72.0% |
| 3684830 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.74 | 60.0 | 5.04e-01 | 91.4% | 57.0% |
| 4076629 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.74 | 59.0 | 3.83e-01 | 91.4% | 35.3% |
| 4184330 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.73 | 60.0 | 5.11e-01 | 93.1% | 57.0% |
| 4318541 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.71 | 56.0 | 4.63e-01 | 93.1% | 47.6% |
| 3707613 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.68 | 52.0 | 3.47e-01 | 86.2% | 23.2% |
| 5056432 | 607.1.1.0 ↗ | alpha arrays › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain | 0.65 | 51.0 | 4.14e-01 | 91.4% | 65.6% |
D4
medium
residues 16-127
D5
medium
residues 176-242
D6
medium
residues 479-552
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25746.2 best | Phage_Repressor_c | 106.9 | 1.90e-30 | 100.0% | 20.3% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5bn3A04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.71 | 39.0 | 3.17e-01 | 78.4% | 28.8% |
| 2fa5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 4.16e-01 | 82.4% | 79.9% |
| 1f5aA01 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.66 | 45.0 | 4.05e-01 | 71.6% | 72.0% |
| 2wbiB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.65 | 52.0 | 4.06e-01 | 87.8% | 76.6% |
| 3owaA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.64 | 57.0 | 4.34e-01 | 98.6% | 70.2% |
| 1ms5B02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 43.0 | 2.96e-01 | 78.4% | 20.6% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.63 | 46.0 | 3.54e-01 | 77.0% | 53.2% |
| 1fuiA01 | 3.40.50.1070 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 44.0 | 3.39e-01 | 77.0% | 71.4% |
| 1zs3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 47.0 | 3.54e-01 | 82.4% | 59.1% |
| 6xzqA01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.58 | 43.0 | 3.35e-01 | 78.4% | 67.9% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 40.0 | 4.30e-01 | 73.0% | 87.1% |
| 2wghA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.54 | 45.0 | 2.60e-01 | 89.2% | 30.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4573073 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.79 | 65.0 | 5.66e-01 | 89.2% | 87.3% |
| 4255464 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.76 | 65.0 | 4.48e-01 | 94.6% | 76.7% |
| 3969922 | 633.6.1.4 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_2 | 0.72 | 62.0 | 4.87e-01 | 94.6% | 83.3% |
| 3943221 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.72 | 61.0 | 4.84e-01 | 94.6% | 83.3% |
| 4057499 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.70 | 61.0 | 5.23e-01 | 94.6% | 79.1% |
| 3072566 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.68 | 56.0 | 4.36e-01 | 90.5% | 75.6% |
| 4983842 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.68 | 57.0 | 4.56e-01 | 94.6% | 83.3% |
| 3288433 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.67 | 57.0 | 4.31e-01 | 93.2% | 73.1% |
| 5038056 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.63 | 44.0 | 3.92e-01 | 73.0% | 53.3% |
| 4541653 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.61 | 52.0 | 4.73e-01 | 91.9% | 72.6% |
| 3230011 | 6106.1.1.0 ↗ | extended segments › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY | 0.61 | 42.0 | 4.00e-01 | 71.6% | 98.8% |
| 3382136 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.58 | 37.0 | 2.39e-01 | 73.0% | 13.9% |
| 3835991 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.56 | 47.0 | 4.36e-01 | 94.6% | 92.6% |
D7
medium
residues 698-749
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25746.2 best | Phage_Repressor_c | 41.4 | 1.60e-10 | 100.0% | 14.4% |