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JX182372.1__AFU62219.1__TG1_24__00024
Bact-VirJX182372.1__AFU62219.1__TG1_24__00024
Identity
- Accession:
- JX182372 ↗
- Kingdom:
- phage
Quality
85.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Colingsworthviridae›
Tigunavirus›
Streptomyces_phage_TG1
TaxID: 2927987
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-70
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.86 | 67.0 | 5.53e-01 | 96.2% | 49.4% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.85 | 49.0 | 4.79e-01 | 80.8% | 52.6% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.83 | 50.0 | 4.09e-01 | 75.0% | 36.4% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.80 | 49.0 | 4.11e-01 | 80.8% | 38.4% |
| 1cukA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.73 | 46.0 | 4.12e-01 | 88.5% | 43.4% |
| 5jtfB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.71 | 60.0 | 4.13e-01 | 94.2% | 93.7% |
| 2lmgA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.71 | 49.0 | 4.31e-01 | 88.5% | 50.0% |
| 2w4sA00 | 1.10.10.1440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain | 0.71 | 55.0 | 4.67e-01 | 88.5% | 51.2% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 46.0 | 4.45e-01 | 88.5% | 60.3% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.70 | 51.0 | 4.20e-01 | 86.5% | 42.6% |
| 2fckA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.70 | 60.0 | 4.12e-01 | 94.2% | 61.3% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.70 | 56.0 | 5.24e-01 | 90.4% | 71.9% |
| 2j9wB00 | 1.20.120.1130 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain | 0.69 | 59.0 | 4.63e-01 | 90.4% | 78.8% |
| 2zb9A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 44.0 | 4.53e-01 | 75.0% | 70.0% |
| 3bhqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 56.0 | 3.84e-01 | 98.1% | 28.7% |
| 3exnA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.67 | 55.0 | 3.98e-01 | 94.2% | 45.1% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.66 | 49.0 | 4.23e-01 | 80.8% | 51.8% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 49.0 | 3.90e-01 | 94.2% | 42.6% |
| 1ic8A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 59.0 | 4.82e-01 | 100.0% | 81.9% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 48.0 | 4.48e-01 | 88.5% | 63.5% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 47.0 | 4.35e-01 | 82.7% | 60.6% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 47.0 | 4.10e-01 | 80.8% | 52.6% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.65 | 45.0 | 4.01e-01 | 73.1% | 87.5% |
| 2ctoA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.65 | 45.0 | 4.34e-01 | 86.5% | 63.9% |
| 1knzA01 | 6.10.280.20 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rotavirus non-structural protein NSP3, N-terminal domain | 0.63 | 52.0 | 4.31e-01 | 98.1% | 91.2% |
| 2rekA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 51.0 | 3.72e-01 | 100.0% | 29.7% |
| 4iejA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 51.0 | 4.52e-01 | 90.4% | 98.7% |
| 3er9B01 | 1.20.1270.320 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Poxvirus poly(A) polymerase, N domain | 0.63 | 50.0 | 4.10e-01 | 98.1% | 46.2% |
| 3lulA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.62 | 47.0 | 3.83e-01 | 88.5% | 67.0% |
| 2ja2A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.59 | 41.0 | 4.19e-01 | 78.8% | 75.0% |
| 7ovuA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 48.0 | 3.34e-01 | 94.2% | 61.7% |
| 4ywoA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 47.0 | 3.19e-01 | 96.2% | 24.5% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.57 | 43.0 | 4.04e-01 | 86.5% | 65.7% |
| 7neaA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.57 | 47.0 | 3.64e-01 | 94.2% | 62.8% |
| 8f2lE01 | 1.10.1740.110 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.56 | 43.0 | 3.55e-01 | 86.5% | 57.6% |
| 1i36A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 43.0 | 3.48e-01 | 94.2% | 44.4% |
| 3t38A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 48.0 | 3.57e-01 | 98.1% | 89.8% |
| 1i24A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.54 | 43.0 | 3.08e-01 | 86.5% | 31.0% |
| 1jeqA05 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.54 | 38.0 | 3.85e-01 | 82.7% | 76.5% |
| 7z67A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 46.0 | 3.07e-01 | 98.1% | 84.9% |
| 2lfhA00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.51 | 41.0 | 3.81e-01 | 90.4% | 79.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285585 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.82 | 74.0 | 5.39e-01 | 100.0% | 38.5% |
| 3283655 | 3812.1.1.0 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE | 0.82 | 48.0 | 4.90e-01 | 73.1% | 62.0% |
| 3696367 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 66.0 | 5.84e-01 | 100.0% | 65.3% |
| 3267628 | 397.2.1.0 ↗ | few secondary structure elements › Toxic hairpin › Neurotoxin B-IV › Neurotoxin B-IV | 0.77 | 53.0 | 5.88e-01 | 71.2% | 97.5% |
| 3716289 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.76 | 60.0 | 4.28e-01 | 90.4% | 28.5% |
| 4944233 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.75 | 51.0 | 4.62e-01 | 88.5% | 52.9% |
| 4611743 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.73 | 62.0 | 5.11e-01 | 100.0% | 53.3% |
| 4527734 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.73 | 60.0 | 5.61e-01 | 100.0% | 75.4% |
| 3564395 | 5031.1.1.4 ↗ | extended segments › Photosystem II reaction center protein J, PsbJ › Photosystem II reaction center protein J, PsbJ › Photosystem II reaction center protein J, PsbJ › Yip1 | 0.72 | 59.0 | 3.96e-01 | 92.3% | 33.7% |
| 3995509 | 3730.1.1.0 ↗ | alpha arrays › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain | 0.72 | 52.0 | 4.86e-01 | 76.9% | 84.1% |
| 4886437 | 6130.1.1.0 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain | 0.71 | 55.0 | 5.13e-01 | 92.3% | 67.1% |
| 5047661 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.71 | 48.0 | 3.51e-01 | 71.2% | 73.1% |
| 3483899 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.71 | 61.0 | 4.68e-01 | 100.0% | 41.6% |
| 4957771 | 5069.1.3.137 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF7521 | 0.71 | 53.0 | 4.47e-01 | 86.5% | 47.8% |
| 3376780 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.70 | 52.0 | 4.35e-01 | 100.0% | 48.2% |
| 3206640 | 103.4.1.13 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF28365 | 0.69 | 55.0 | 4.59e-01 | 94.2% | 52.0% |
| 3576651 | 148.1.1.18 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-S | 0.67 | 57.0 | 4.79e-01 | 100.0% | 58.9% |
| 3795168 | 2007.1.6.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › ELFV_dehydrog_N | 0.65 | 59.0 | 3.77e-01 | 100.0% | 38.3% |
| 4861235 | 3078.1.1.1 ↗ | extended segments › RNA polymerase PB1 C-terminal fragment › RNA polymerase PB1 C-terminal fragment › RNA polymerase PB1 C-terminal fragment › Flu_PB1 | 0.64 | 47.0 | 4.61e-01 | 92.3% | 71.4% |
| 3570117 | 375.6.1.2 ↗ | few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › PF31275 | 0.64 | 48.0 | 4.59e-01 | 98.1% | 68.3% |
| 4636432 | 6130.1.1.0 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain | 0.64 | 55.0 | 5.11e-01 | 96.2% | 80.0% |
| 3314379 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.64 | 54.0 | 4.86e-01 | 92.3% | 70.0% |
| 4541059 | 589.1.2.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C | 0.63 | 55.0 | 3.79e-01 | 100.0% | 62.0% |
| 138333 | 4020.1.1.1 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 | 0.62 | 47.0 | 3.81e-01 | 88.5% | 65.8% |
| 3552184 | 1045.1.1.1 ↗ | alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Mre11_DNA_bind | 0.62 | 49.0 | 3.92e-01 | 86.5% | 65.7% |
| 4333013 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.62 | 50.0 | 4.31e-01 | 88.5% | 57.5% |
| 4637522 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.62 | 50.0 | 3.84e-01 | 88.5% | 40.0% |
| 3386111 | 6130.1.1.0 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain | 0.61 | 48.0 | 4.48e-01 | 96.2% | 68.6% |
| 4108697 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.61 | 48.0 | 3.03e-01 | 84.6% | 30.8% |
| 4061700 | 101.1.1.312 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ustilago_mating, Homeobox_KN | 0.61 | 50.0 | 3.75e-01 | 98.1% | 78.6% |
| 3767618 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.60 | 51.0 | 3.90e-01 | 98.1% | 88.0% |
| 4353609 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.60 | 52.0 | 3.06e-01 | 100.0% | 22.7% |
| 3971484 | 5063.1.1.2 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › MadL | 0.59 | 46.0 | 3.77e-01 | 94.2% | 42.6% |
| 4422279 | 6130.1.1.1 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Se-cys_synth_N | 0.59 | 50.0 | 4.51e-01 | 98.1% | 89.3% |
| 4255370 | 6130.1.1.1 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Se-cys_synth_N | 0.58 | 50.0 | 4.58e-01 | 98.1% | 78.6% |
| 4943584 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.58 | 49.0 | 4.19e-01 | 90.4% | 98.8% |
| 3200288 | 192.20.1.0 ↗ | alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD | 0.58 | 53.0 | 4.03e-01 | 100.0% | 48.2% |
| 3991948 | 2007.1.6.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › ELFV_dehydrog_N | 0.58 | 49.0 | 3.30e-01 | 96.2% | 38.5% |
| 3222477 | 101.1.2.712 ↗ | alpha arrays › HTH › HTH › winged helix domain › FNIP_C | 0.58 | 51.0 | 3.27e-01 | 100.0% | 64.4% |
| 3629047 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.57 | 44.0 | 3.77e-01 | 94.2% | 100.0% |
| 3264888 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 45.0 | 4.07e-01 | 86.5% | 82.9% |
| 3469367 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.56 | 49.0 | 3.60e-01 | 98.1% | 71.1% |
| 3167929 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.53 | 47.0 | 4.18e-01 | 94.2% | 98.6% |
| 3178113 | 604.5.1.68 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TMEM33_Pom33 | 0.53 | 49.0 | 3.27e-01 | 100.0% | 50.0% |