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JX182372.1__AFU62238.1__TG1_43__00043

Bact-Vir

JX182372.1__AFU62238.1__TG1_43__00043

Identity

Accession:
JX182372 ↗
Kingdom:
phage

Quality

88.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Colingsworthviridae› Tigunavirus› Streptomyces_phage_TG1

TaxID: 2927987

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-105
PDB
Domain cluster: rep: NC_047904.1__YP_009796774.1__HOS57_gp59__00052__D26-123
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r2cB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 50.0 4.92e-01 91.0% 71.6%
2uvaG08 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 48.0 3.45e-01 83.0% 45.4%
6a6yA00 2.60.40.1490 Mainly Beta › Sandwich › Immunoglobulin-like › Histone chaperone ASF1-like 0.59 52.0 4.58e-01 100.0% 69.7%
1bu8A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.58 43.0 4.31e-01 100.0% 75.5%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.57 36.0 3.71e-01 88.0% 66.3%
5fvjA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 44.0 3.80e-01 85.0% 84.8%
3rbyA02 2.40.128.310 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain 0.56 33.0 3.44e-01 89.0% 62.1%
3kysA00 2.70.50.80 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › 0.56 49.0 3.93e-01 99.0% 51.0%
1ilyA00 3.30.420.100 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.53 40.0 4.20e-01 95.0% 90.0%
3pp9B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 41.0 3.44e-01 86.0% 87.9%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 45.0 3.61e-01 100.0% 75.0%
3f7eA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 44.0 4.13e-01 100.0% 92.2%
1rm6B02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.50 37.0 3.64e-01 79.0% 100.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5063704 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.75 35.0 4.34e-01 100.0% 69.2%
5069904 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.75 39.0 3.48e-01 100.0% 37.1%
5016503 77.1.1.0 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.71 57.0 5.60e-01 100.0% 79.1%
3980088 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.69 37.0 3.67e-01 100.0% 49.1%
3451905 5015.1.1.0 ↗ extended segments › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex 0.68 32.0 4.40e-01 99.0% 90.0%
3227515 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.65 35.0 3.27e-01 79.0% 41.1%
3190757 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.62 28.0 3.52e-01 88.0% 68.3%
3570911 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.61 50.0 3.43e-01 89.0% 48.1%
4948943 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 36.0 4.01e-01 99.0% 76.9%
4161960 11.8.1.4 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like › Aegerolysin 0.54 45.0 4.24e-01 100.0% 72.8%
3599732 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.54 45.0 3.49e-01 91.0% 56.1%
3711998 246.2.1.0 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.53 44.0 2.90e-01 89.0% 32.0%
4170432 4998.1.1.1 ↗ beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 0.53 39.0 3.68e-01 94.0% 62.4%
3424803 10.10.1.4 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › ATS3 0.52 45.0 4.28e-01 98.0% 98.3%
4976581 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 40.0 2.66e-01 82.0% 61.0%
3966622 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.51 43.0 3.27e-01 94.0% 92.8%
3273903 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.51 41.0 2.94e-01 93.0% 37.4%
3268279 246.2.1.5 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,ASMase_C 0.51 47.0 3.03e-01 100.0% 81.9%
3534351 246.2.1.5 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,ASMase_C 0.51 47.0 3.03e-01 100.0% 80.2%
3592707 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.50 46.0 3.15e-01 100.0% 99.1%
4950505 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.50 42.0 3.42e-01 93.0% 82.1%
3218637 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.50 38.0 3.05e-01 81.0% 80.0%
3621737 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.50 41.0 3.30e-01 91.0% 69.3%