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JX195166.1__AFQ22231.1__My1_072__00072
Bact-VirJX195166.1__AFQ22231.1__My1_072__00072
Identity
- Accession:
- JX195166 ↗
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Taxonomy
TaxID: 1204539
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-80
Domain cluster:
rep: OP778610.1__WBF77848.1__W70_92__00047__D9-78
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.73 | 46.0 | 3.97e-01 | 88.5% | 42.4% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.69 | 50.0 | 3.45e-01 | 75.6% | 47.3% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.68 | 55.0 | 4.70e-01 | 87.2% | 93.5% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.68 | 58.0 | 4.17e-01 | 94.9% | 91.3% |
| 7d8gA01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.66 | 59.0 | 4.61e-01 | 100.0% | 47.9% |
| 8dqwG01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.65 | 48.0 | 3.71e-01 | 78.2% | 93.1% |
| 2acaA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.64 | 41.0 | 3.15e-01 | 74.4% | 29.3% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.61 | 44.0 | 4.45e-01 | 98.7% | 75.0% |
| 6yfiB01 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.60 | 49.0 | 4.03e-01 | 87.2% | 57.8% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 45.0 | 3.15e-01 | 82.1% | 51.9% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 49.0 | 4.02e-01 | 94.9% | 53.4% |
| 2lm3A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.56 | 51.0 | 3.74e-01 | 100.0% | 80.5% |
| 1wnhA01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 43.0 | 3.99e-01 | 84.6% | 90.0% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 48.0 | 3.39e-01 | 98.7% | 41.0% |
| 1ct9A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 49.0 | 3.67e-01 | 100.0% | 77.6% |
| 3f79E00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.54 | 49.0 | 3.46e-01 | 100.0% | 63.6% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 47.0 | 3.84e-01 | 100.0% | 94.6% |
| 2f2hA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.53 | 47.0 | 3.34e-01 | 100.0% | 42.9% |
| 1yrzA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.43e-01 | 100.0% | 71.7% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4934001 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.73 | 52.0 | 4.40e-01 | 74.4% | 95.2% |
| 3500806 | 9.2.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg | 0.70 | 54.0 | 4.10e-01 | 82.1% | 68.9% |
| 3687610 | 9.2.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg | 0.68 | 54.0 | 3.78e-01 | 85.9% | 88.4% |
| 5013018 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.68 | 56.0 | 4.67e-01 | 94.9% | 53.1% |
| 4026443 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.64 | 49.0 | 3.98e-01 | 83.3% | 72.9% |
| 5078623 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.64 | 41.0 | 3.48e-01 | 74.4% | 40.0% |
| 3722127 | 9.2.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg | 0.62 | 53.0 | 3.92e-01 | 96.2% | 89.3% |
| 4404709 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.61 | 45.0 | 3.43e-01 | 100.0% | 34.3% |
| 3793090 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.61 | 49.0 | 3.08e-01 | 85.9% | 32.2% |
| 3836393 | 9.2.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg | 0.60 | 51.0 | 3.86e-01 | 94.9% | 85.8% |
| 3215014 | 632.22.1.184 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › SMC_N | 0.60 | 48.0 | 2.93e-01 | 85.9% | 25.7% |
| 3394646 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.60 | 53.0 | 4.00e-01 | 98.7% | 70.0% |
| 3580295 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.60 | 48.0 | 3.66e-01 | 85.9% | 72.1% |
| 3743662 | 9.2.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg | 0.59 | 51.0 | 3.78e-01 | 96.2% | 91.7% |
| 5079230 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.59 | 52.0 | 4.66e-01 | 96.2% | 72.4% |
| 3701925 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.59 | 50.0 | 4.30e-01 | 100.0% | 60.0% |
| 3217670 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.57 | 34.0 | 3.60e-01 | 73.1% | 65.7% |
| 5057515 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 37.0 | 4.21e-01 | 73.1% | 93.3% |
| 3929846 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 44.0 | 3.00e-01 | 92.3% | 41.9% |
| 3836347 | 243.3.1.26 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › protein_MS5 | 0.54 | 43.0 | 3.74e-01 | 89.7% | 91.2% |
| 5003245 | 243.8.1.0 ↗ | a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein | 0.53 | 43.0 | 4.49e-01 | 97.4% | 100.0% |
| 3984944 | 213.2.1.0 ↗ | a+b three layers › Nat/Ivy › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme, Ivy | 0.51 | 41.0 | 4.03e-01 | 87.2% | 81.2% |
| 4424927 | 243.5.1.4 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › AGAO-like_N2 | 0.50 | 40.0 | 3.77e-01 | 94.9% | 72.6% |