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JX306041.1__AFQ22592.1__X__00055
Bact-VirJX306041.1__AFQ22592.1__X__00055
Identity
- Accession:
- JX306041 ↗
- Kingdom:
- phage
Quality
65.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tulanevirus›
Stenotrophomonas_phage_IME13
TaxID: 1211280
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-80
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pmyA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.71 | 50.0 | 4.50e-01 | 76.5% | 58.9% |
| 3m8jA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.69 | 54.0 | 4.50e-01 | 100.0% | 48.9% |
| 1omvA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.66 | 47.0 | 3.98e-01 | 76.5% | 55.8% |
| 5zr6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 4.95e-01 | 88.2% | 84.7% |
| 1aqlA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 47.0 | 2.72e-01 | 94.1% | 9.8% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.57 | 44.0 | 3.80e-01 | 92.2% | 67.4% |
| 1qd1B02 | 3.30.70.670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain | 0.55 | 45.0 | 3.42e-01 | 100.0% | 54.5% |
| 4uzzB00 | 6.10.250.2800 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 41.0 | 3.82e-01 | 84.3% | 76.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3739094 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 64.0 | 5.99e-01 | 100.0% | 81.5% |
| 3709824 | 101.21.1.0 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit | 0.73 | 60.0 | 5.64e-01 | 98.0% | 90.8% |
| 3536325 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 60.0 | 5.92e-01 | 100.0% | 94.5% |
| 3963007 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.69 | 56.0 | 3.41e-01 | 100.0% | 32.9% |
| 3491348 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 56.0 | 4.88e-01 | 100.0% | 69.4% |
| 3264227 | 108.1.1.1 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 | 0.67 | 48.0 | 4.03e-01 | 76.5% | 56.7% |
| 3263473 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.61 | 52.0 | 4.56e-01 | 98.0% | 76.2% |
| 3452003 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.61 | 48.0 | 3.39e-01 | 100.0% | 37.6% |
| 3190754 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.60 | 49.0 | 4.57e-01 | 98.0% | 71.4% |
| 3239394 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.60 | 45.0 | 4.17e-01 | 100.0% | 64.3% |
| 3797607 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 50.0 | 4.27e-01 | 100.0% | 80.0% |
| 3630289 | 101.1.1.331 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF27957 | 0.58 | 49.0 | 4.28e-01 | 100.0% | 89.4% |