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JX483881.1__AGC36045.1__RHEph10_gp001__00001
Bact-VirJX483881.1__AGC36045.1__RHEph10_gp001__00001
Identity
- Accession:
- JX483881 ↗
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-139
Domain cluster:
rep: DQ340064.2__ABC61276.1__X__00022__D272-425
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pk8A00 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.76 | 45.0 | 5.39e-01 | 100.0% | 87.2% |
| 4my2A02 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.50 | 26.0 | 3.09e-01 | 92.8% | 71.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3949155 | 2485.3.1.11 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like | 0.91 | 85.0 | 6.61e-01 | 100.0% | 50.6% |
| 4873245 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.78 | 63.0 | 6.54e-01 | 98.6% | 90.6% |
| 4944707 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.56 | 30.0 | 3.10e-01 | 94.2% | 52.9% |
| 5047935 | 12.1.1.94 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF4139 | 0.51 | 30.0 | 3.03e-01 | 94.2% | 55.2% |