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JX483881.1__AGC36110.1__RHEph10_gp066__00066

Bact-Vir

JX483881.1__AGC36110.1__RHEph10_gp066__00066

Identity

Accession:
JX483881 ↗
Kingdom:
phage

Quality

80.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHEph10

TaxID: 1220717

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 49-123
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b8pA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.67 51.0 3.91e-01 81.3% 98.3%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 40.0 3.32e-01 77.3% 93.1%
2dy1A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 45.0 3.07e-01 90.7% 74.9%
3kz5E00 6.10.140.1550 Special › Helix non-globular › Helix Hairpins › 0.52 30.0 3.63e-01 82.7% 89.6%
2gwcA00 3.30.590.20 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › 0.52 45.0 2.84e-01 100.0% 51.8%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.52 34.0 3.12e-01 85.3% 49.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 33.0 3.66e-01 76.0% 85.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4434473 279.1.1.1 ↗ a+b complex topology › LDH C-terminal domain-like › LDH C-terminal domain-like › LDH C-terminal domain-like › Ldh_1_C 0.68 51.0 3.87e-01 80.0% 97.2%
3582655 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.55 37.0 3.55e-01 70.7% 74.4%
4011394 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.54 38.0 2.89e-01 74.7% 44.1%
3615679 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.50 43.0 3.22e-01 96.0% 76.9%
3927363 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 32.0 3.76e-01 77.3% 100.0%