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JX483881.1__AGC36157.1__RHEph10_gp114__00113

Bact-Vir

JX483881.1__AGC36157.1__RHEph10_gp114__00113

Identity

Accession:
JX483881 ↗
Kingdom:
phage

Quality

90.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHEph10

TaxID: 1220717

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-131
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tr8A01 2.20.70.30 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain 0.66 29.0 4.16e-01 96.9% 96.2%
1wjjA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 39.0 4.20e-01 98.4% 93.6%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 26.0 3.50e-01 93.0% 68.8%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.65 25.0 3.34e-01 93.8% 64.6%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.63 25.0 3.59e-01 93.0% 80.0%
4514731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 25.0 2.97e-01 95.3% 52.9%
4214438 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.58 24.0 3.17e-01 96.1% 67.7%
5061147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 27.0 3.09e-01 93.0% 60.0%
5048974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 26.0 2.79e-01 93.0% 50.0%
3473732 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 24.0 3.18e-01 93.8% 76.9%
3616088 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 24.0 3.17e-01 94.5% 75.7%
3928928 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 25.0 3.13e-01 96.1% 76.0%