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JX483881.1__AGC36181.1__RHEph10_gp138__00137

Bact-Vir

JX483881.1__AGC36181.1__RHEph10_gp138__00137

Identity

Accession:
JX483881 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-77
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gr5C01 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.57 38.0 3.75e-01 87.9% 64.1%
2ln7A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.53 38.0 2.92e-01 79.3% 88.4%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.51 34.0 3.34e-01 93.1% 60.6%
1nijA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 38.0 2.71e-01 84.5% 36.8%
3p1mA00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.50 37.0 2.93e-01 81.0% 73.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5027909 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 36.0 3.62e-01 77.6% 63.3%
5022651 375.11.1.0 few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ 0.55 36.0 3.42e-01 77.6% 55.7%
3827247 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.53 39.0 2.54e-01 81.0% 55.6%
3211769 376.1.6.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain 0.50 38.0 3.80e-01 82.8% 86.7%