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JX507079.1__AFU62913.1__AcaML1_0069__00068

Bact-Vir

JX507079.1__AFU62913.1__AcaML1_0069__00068

Identity

Accession:
JX507079 ↗
Kingdom:
phage

Quality

81.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acidithiobacillus_phage_AcaML1

TaxID: 1229761

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 154-283
PDB
Domain cluster: rep: Ig7659_scaffold_8_prodigal-single.1__X__X__00247__D185-282
D2 medium residues 50-150
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05598.17 best DUF772 39.2 1.10e-09 57.4% 57.1%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yviA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 29.0 3.08e-01 82.2% 55.1%
2vsgA02 1.10.470.10 Mainly Alpha › Orthogonal Bundle › Variant Surface Glycoprotein, subunit A; domain 2 › Variant Surface Glycoprotein, subunit A, domain 2 0.52 41.0 3.60e-01 87.1% 74.4%
2whnA00 1.20.81.30 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F 0.50 36.0 3.58e-01 76.2% 93.6%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4125245 101.1.2.813 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF772 1.00 76.0 7.38e-01 78.2% 71.8%
5035003 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.83 58.0 5.75e-01 75.2% 68.6%
5026084 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 55.0 5.67e-01 76.2% 72.6%
3954386 101.1.1.248 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF772 0.81 61.0 5.80e-01 82.2% 68.7%
4954371 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 50.0 5.92e-01 71.3% 94.3%
3949232 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 72.0 4.76e-01 100.0% 27.5%
3587330 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 71.0 4.64e-01 100.0% 25.7%
4031227 101.1.1.248 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF772 0.76 48.0 5.79e-01 78.2% 100.0%
3964125 101.1.1.248 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF772 0.75 56.0 5.23e-01 79.2% 69.6%
3965831 101.1.3.17 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF772 0.74 56.0 5.30e-01 79.2% 72.5%
5057202 101.1.3.8 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.60 40.0 4.55e-01 78.2% 97.1%
5033838 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 37.0 3.91e-01 77.2% 72.2%
3223453 101.1.2.506 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.57 40.0 4.04e-01 74.3% 88.6%
5005042 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 36.0 3.69e-01 77.2% 65.0%