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JX507079.1__AFU62916.1__AcaML1_0072__00071

Bact-Vir

JX507079.1__AFU62916.1__AcaML1_0072__00071

Identity

Accession:
JX507079 ↗
Kingdom:
phage

Quality

84.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acidithiobacillus_phage_AcaML1

TaxID: 1229761

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-158
PDB
Domain cluster: rep: IMGVR_UViG_3300029589_000238-3300029589-Ga0245106_1028441__D125-146_246-312_411-498
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13751.13 best DDE_Tnp_1_6 33.6 6.10e-08 48.7% 48.8%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hjxA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 40.0 3.36e-01 77.8% 100.0%
7watB02 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.54 32.0 2.53e-01 89.9% 28.3%
1vypX00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 40.0 3.13e-01 79.1% 95.6%
6jtdA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 40.0 3.38e-01 77.2% 97.7%
3s2cA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 41.0 3.23e-01 82.3% 87.4%
4rz2B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 39.0 3.33e-01 76.6% 95.7%
1q45A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 42.0 3.30e-01 89.9% 95.9%
3ix9A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.51 38.0 3.82e-01 79.1% 99.4%
6mp7A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 40.0 3.19e-01 84.2% 98.2%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3955806 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.85 69.0 6.81e-01 84.2% 84.8%
4958657 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.82 66.0 6.74e-01 84.2% 96.1%
4950545 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.81 63.0 6.73e-01 80.4% 97.1%
4498604 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.78 61.0 6.30e-01 80.4% 86.7%
3905705 2484.1.1.120 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 0.72 56.0 5.22e-01 81.6% 65.6%
3468786 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.69 55.0 4.61e-01 83.5% 74.6%
None — 0.67 54.0 4.40e-01 84.8% 69.1%
3309722 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.66 45.0 5.25e-01 82.9% 100.0%
3959901 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 43.0 4.65e-01 74.7% 81.5%
None — 0.64 51.0 4.38e-01 84.2% 67.2%
3993283 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 53.0 4.47e-01 91.1% 60.0%
3648618 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.61 48.0 4.47e-01 84.2% 66.7%
5023562 2002.1.1.74 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2 0.52 41.0 3.33e-01 83.5% 98.4%