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JX560521.1__AFU62258.1__phiAC-1_0009__00009

Bact-Vir

JX560521.1__AFU62258.1__phiAC-1_0009__00009

Identity

Accession:
JX560521 ↗
Kingdom:
phage

Quality

91.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-55
PDB
Domain cluster: representative
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.92 79.0 7.91e-01 91.8% 100.0%
2pmsC00 6.10.140.920 Special › Helix non-globular › Helix Hairpins › 0.91 83.0 6.27e-01 100.0% 45.9%
1yc9A01 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.91 82.0 4.86e-01 100.0% 17.1%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.91 82.0 7.08e-01 100.0% 67.6%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.90 84.0 7.00e-01 100.0% 69.2%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.90 84.0 5.72e-01 100.0% 98.7%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 80.0 6.94e-01 100.0% 65.8%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 82.0 6.51e-01 100.0% 53.3%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.89 81.0 6.63e-01 100.0% 62.8%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.89 81.0 7.47e-01 100.0% 79.0%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.89 81.0 6.61e-01 100.0% 73.3%
3kr9A02 1.10.287.1890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.89 72.0 6.69e-01 87.8% 72.1%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.89 80.0 7.04e-01 100.0% 76.1%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.89 80.0 6.29e-01 100.0% 53.1%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.88 77.0 5.62e-01 95.9% 70.5%
1vp7A00 1.10.287.1040 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit 0.88 77.0 6.83e-01 95.9% 69.1%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.88 79.0 4.97e-01 100.0% 20.8%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.88 71.0 5.48e-01 89.8% 42.2%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.87 78.0 7.36e-01 100.0% 86.2%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.87 77.0 6.58e-01 100.0% 68.4%
3rguB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.87 77.0 6.32e-01 100.0% 62.1%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.87 70.0 6.03e-01 100.0% 58.1%
3qf7A02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.87 80.0 7.25e-01 100.0% 82.5%
1orsC00 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.86 78.0 5.64e-01 100.0% 37.1%
6xkyA01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.86 78.0 5.14e-01 100.0% 27.3%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.86 76.0 6.34e-01 100.0% 62.4%
2o8pA00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.86 70.0 4.50e-01 95.9% 20.1%
1t7sA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.86 76.0 5.55e-01 100.0% 38.8%
1ykhA00 6.10.140.200 Special › Helix non-globular › Helix Hairpins › 0.86 78.0 6.16e-01 100.0% 52.6%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.86 74.0 6.03e-01 100.0% 52.7%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.86 78.0 7.07e-01 100.0% 78.1%
1rq0A01 6.10.140.160 Special › Helix non-globular › Helix Hairpins › 0.85 76.0 6.34e-01 100.0% 62.7%
3llkA01 1.20.120.1960 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain 0.85 69.0 5.38e-01 91.8% 43.9%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.85 75.0 5.61e-01 100.0% 41.9%
3dytA02 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.84 76.0 4.97e-01 100.0% 30.0%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.84 73.0 4.64e-01 100.0% 20.3%
3hiuD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.84 75.0 5.21e-01 100.0% 32.9%
2dw4A03 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.84 67.0 5.20e-01 100.0% 41.6%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.84 76.0 6.52e-01 100.0% 64.5%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.83 74.0 6.66e-01 100.0% 89.6%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.83 70.0 4.93e-01 100.0% 31.7%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.83 73.0 6.79e-01 100.0% 82.0%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.82 73.0 5.77e-01 100.0% 53.5%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 70.0 5.03e-01 100.0% 34.0%
1u5eA01 6.10.250.220 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.80 70.0 6.91e-01 100.0% 92.5%
3syvA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.79 68.0 4.35e-01 100.0% 20.0%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.79 69.0 5.73e-01 100.0% 96.6%
3rx6A00 1.20.58.1090 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer 0.78 61.0 4.02e-01 85.7% 21.9%
2pvqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.78 69.0 5.36e-01 100.0% 48.1%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.78 66.0 5.83e-01 100.0% 69.3%
4pdyA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.78 69.0 4.38e-01 100.0% 23.6%
4jvyB00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.78 70.0 4.55e-01 95.9% 88.4%
4cpgA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.78 63.0 5.70e-01 93.9% 65.2%
3rkvA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 66.0 4.77e-01 100.0% 33.3%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.76 65.0 5.96e-01 100.0% 80.3%
4a64A01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.75 68.0 4.90e-01 100.0% 63.6%
2ficB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.75 65.0 4.32e-01 100.0% 25.9%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 62.0 5.48e-01 100.0% 65.8%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.73 64.0 5.63e-01 100.0% 68.9%
1xqrA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.73 61.0 3.90e-01 100.0% 18.0%
3zdmB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.73 60.0 6.04e-01 93.9% 96.0%
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 60.0 4.86e-01 98.0% 46.6%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.71 59.0 5.07e-01 93.9% 60.8%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 55.0 5.28e-01 91.8% 100.0%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.69 61.0 4.67e-01 98.0% 78.9%
3purA03 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 56.0 4.52e-01 100.0% 57.3%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.69 58.0 5.52e-01 100.0% 88.1%
4nv0A02 1.10.150.340 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain 0.69 59.0 4.99e-01 100.0% 58.5%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.68 62.0 5.58e-01 100.0% 90.8%
3lnnB03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.68 56.0 5.16e-01 100.0% 76.1%
1l5jA03 3.40.1060.10 Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 0.65 53.0 3.70e-01 93.9% 26.6%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3233284 5001.1.1.84 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz 0.99 94.0 5.54e-01 100.0% 16.1%
5070360 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.97 90.0 6.05e-01 98.0% 31.0%
5070059 3834.1.1.25 alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 0.96 91.0 5.51e-01 100.0% 20.4%
4994917 3834.1.1.25 alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 0.96 88.0 5.39e-01 100.0% 19.6%
4998688 192.2.1.89 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF7121 0.95 87.0 5.32e-01 98.0% 19.6%
4396464 605.1.1.305 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Exonuc_VII_S 0.94 88.0 8.14e-01 100.0% 81.7%
4927671 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.94 85.0 5.34e-01 98.0% 21.3%
4985462 192.2.1.89 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF7121 0.94 87.0 5.38e-01 100.0% 25.0%
4982777 3291.1.1.238 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF7121 0.94 86.0 5.31e-01 98.0% 20.9%
4259224 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.94 86.0 5.86e-01 100.0% 31.6%
3964578 5094.1.1.1 a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.94 87.0 6.04e-01 100.0% 35.7%
3808845 5086.1.1.90 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › V_ATPase_I 0.93 88.0 5.96e-01 100.0% 32.7%
4957532 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.93 87.0 6.15e-01 100.0% 46.2%
5020701 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.93 87.0 5.36e-01 100.0% 23.0%
4186985 605.1.1.191 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › NtrY_N 0.93 86.0 6.17e-01 100.0% 42.4%
3215465 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.93 85.0 6.07e-01 100.0% 38.5%
3253283 192.5.1.14 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA 0.93 85.0 6.69e-01 100.0% 81.1%
4311810 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.92 84.0 7.22e-01 100.0% 65.3%
3594586 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.92 85.0 6.67e-01 100.0% 51.6%
5081955 3834.1.1.25 alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 0.92 85.0 5.14e-01 100.0% 18.5%
5084060 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.92 84.0 5.76e-01 100.0% 32.3%
3375405 4323.1.1.1 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.92 85.0 5.83e-01 100.0% 32.7%
5005724 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.92 85.0 5.25e-01 100.0% 25.1%
3967403 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.92 84.0 7.58e-01 100.0% 96.9%
4933354 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.92 82.0 5.09e-01 98.0% 20.0%
3787103 1203.1.2.0 alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.91 83.0 5.85e-01 100.0% 35.0%
3783731 2004.1.1.505 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 0.91 84.0 4.77e-01 100.0% 11.7%
4300897 5094.1.1.1 a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.91 84.0 5.97e-01 100.0% 39.2%
3381605 109.4.1.146 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load 0.91 85.0 4.60e-01 100.0% 10.0%
3676043 5076.2.1.10 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 0.91 84.0 5.04e-01 100.0% 17.9%
3902657 150.1.2.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase 0.91 81.0 5.28e-01 100.0% 25.3%
3925075 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.90 83.0 7.25e-01 100.0% 70.0%
3218199 192.4.1.0 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.90 82.0 6.60e-01 100.0% 54.4%
3779105 3602.1.1.16 alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › SHCBP_N 0.90 83.0 5.64e-01 100.0% 31.6%
3408277 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.90 83.0 6.12e-01 100.0% 55.7%
3491738 632.8.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 0.90 82.0 6.39e-01 100.0% 50.5%
3841109 192.29.1.293 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › SHCBP_N 0.90 83.0 6.38e-01 100.0% 49.0%
4146694 192.29.1.277 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin 0.90 82.0 7.39e-01 100.0% 75.4%
3534202 3602.1.1.16 alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › SHCBP_N 0.90 82.0 6.37e-01 100.0% 49.0%
3631949 309.1.2.5 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › Seryl_tRNA_N 0.90 82.0 5.93e-01 100.0% 39.2%
3931107 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.90 84.0 5.92e-01 100.0% 37.7%
3962991 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.90 81.0 5.27e-01 100.0% 25.6%
3356933 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.89 80.0 5.51e-01 100.0% 31.6%
4124331 192.15.1.76 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CUPID 0.89 80.0 6.09e-01 100.0% 45.5%
4982026 150.1.1.209 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF7121 0.89 82.0 5.72e-01 100.0% 35.7%
4667859 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.89 82.0 6.05e-01 100.0% 43.5%
3623143 192.4.1.0 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.89 80.0 6.60e-01 100.0% 57.6%
3473827 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.89 80.0 7.44e-01 100.0% 93.3%
4978165 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.89 81.0 5.21e-01 100.0% 24.5%
3957419 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.88 79.0 6.84e-01 100.0% 66.7%
4349607 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.88 80.0 6.05e-01 100.0% 45.5%
4202466 192.6.1.0 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.88 75.0 7.76e-01 93.9% 100.0%
3436926 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 79.0 6.85e-01 100.0% 67.6%
3464245 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.88 79.0 5.92e-01 100.0% 43.5%
4054050 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.88 80.0 6.20e-01 100.0% 50.0%
4977429 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.87 79.0 5.59e-01 100.0% 35.0%
3933449 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.87 78.0 6.33e-01 100.0% 55.6%
3885709 192.13.1.0 alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like 0.87 78.0 6.73e-01 100.0% 65.3%
3192393 2004.1.1.430 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn 0.87 78.0 4.32e-01 100.0% 8.0%
3619200 192.15.1.76 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CUPID 0.87 77.0 5.34e-01 100.0% 32.3%
4959101 304.48.1.3 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.87 80.0 4.93e-01 100.0% 25.7%
2456957 192.13.1.1 alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 0.87 77.0 7.37e-01 100.0% 87.5%
3580316 4082.1.1.0 alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain 0.86 71.0 7.31e-01 89.8% 100.0%
3518386 192.1.1.0 alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.86 76.0 6.61e-01 100.0% 66.7%
3990182 3922.1.1.226 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Fy-3 0.86 77.0 5.77e-01 100.0% 44.3%
1547205 6067.1.1.1 alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer 0.86 70.0 7.25e-01 93.9% 95.6%
3755476 3755.1.1.0 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.85 77.0 5.16e-01 100.0% 29.1%
4972401 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.85 77.0 4.94e-01 100.0% 22.8%
5071097 3834.1.1.25 alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 0.85 78.0 4.69e-01 100.0% 17.2%
4435642 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.85 76.0 5.96e-01 100.0% 50.0%
4589656 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.85 76.0 5.34e-01 100.0% 33.8%
2464385 192.27.1.0 alpha bundles › Long alpha-hairpin › Helical hairpin in putative tRNA methyltransferase › Helical hairpin in putative tRNA methyltransferase 0.84 71.0 6.56e-01 93.9% 73.0%
3225544 4006.1.1.0 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain 0.83 74.0 5.80e-01 100.0% 50.0%
3821694 109.46.1.1 alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH 0.82 72.0 4.37e-01 100.0% 15.9%
3286637 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.81 72.0 4.95e-01 100.0% 29.7%
4999337 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.81 73.0 5.04e-01 100.0% 31.6%
3731259 5042.1.1.1 extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA 0.81 73.0 4.83e-01 100.0% 27.4%
3098420 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.79 69.0 5.33e-01 100.0% 84.4%
4873586 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.77 66.0 5.85e-01 100.0% 70.3%
4192699 603.5.1.1 alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN 0.75 62.0 4.68e-01 100.0% 46.9%
4663904 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.66 53.0 4.46e-01 100.0% 66.0%
D2 high residues 62-110
PDB
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2creA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 54.0 4.88e-01 89.8% 84.5%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 52.0 5.09e-01 85.7% 100.0%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 4.81e-01 89.8% 81.1%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 53.0 4.87e-01 89.8% 83.8%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.44e-01 98.0% 96.4%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 54.0 5.08e-01 95.9% 93.7%
2fhdA02 2.30.30.810 Mainly Beta › Roll › SH3 type barrels. › 0.66 55.0 4.89e-01 95.9% 84.7%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 54.0 5.12e-01 100.0% 82.5%
2k3aA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.65 49.0 4.00e-01 85.7% 55.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 49.0 4.72e-01 87.8% 93.3%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 53.0 4.92e-01 98.0% 81.5%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.64 52.0 3.30e-01 100.0% 27.9%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.63 48.0 4.66e-01 87.8% 79.7%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 51.0 4.61e-01 98.0% 89.3%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 4.35e-01 100.0% 55.0%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 5.18e-01 95.9% 100.0%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.62 52.0 3.70e-01 100.0% 70.1%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 4.05e-01 85.7% 73.3%
1hxdA03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 4.60e-01 81.6% 100.0%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.92e-01 98.0% 100.0%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 4.08e-01 89.8% 82.2%
1yy3A02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.58 46.0 3.94e-01 100.0% 98.0%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 46.0 4.30e-01 98.0% 92.6%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 47.0 4.75e-01 100.0% 98.0%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.08e-01 87.8% 93.3%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.05e-01 100.0% 88.3%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 3.98e-01 100.0% 88.0%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 4.03e-01 98.0% 86.8%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 44.0 4.02e-01 100.0% 83.8%
2aehA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.30e-01 89.8% 68.5%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4280256 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.75 60.0 5.99e-01 89.8% 86.0%
3895018 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.73 58.0 5.34e-01 89.8% 98.5%
3700745 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.45e-01 83.7% 88.0%
3854638 4.1.1.131 beta barrels › SH3 › SH3 › SH3 › MLVIN_C 0.72 59.0 4.67e-01 91.8% 51.0%
3263489 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 60.0 5.57e-01 100.0% 100.0%
3936430 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 60.0 5.20e-01 100.0% 67.5%
4974669 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.71 61.0 5.07e-01 100.0% 55.6%
3797486 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 52.0 4.83e-01 83.7% 66.2%
3313139 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.70 59.0 4.08e-01 98.0% 33.1%
4627221 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.69 55.0 5.11e-01 98.0% 69.2%
4116754 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.68 51.0 5.27e-01 83.7% 91.1%
3408592 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 58.0 4.67e-01 100.0% 52.0%
3234274 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 51.0 4.65e-01 85.7% 81.4%
3926017 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.17e-01 89.8% 90.9%
3269758 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 53.0 4.59e-01 89.8% 73.8%
3991244 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.67 51.0 5.32e-01 85.7% 95.6%
3326132 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.27e-01 100.0% 83.1%
3463181 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.04e-01 98.0% 71.4%
3703936 4.18.1.0 beta barrels › SH3 › Plus3 › Plus3 0.66 56.0 4.14e-01 100.0% 57.0%
3433070 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 53.0 4.81e-01 91.8% 68.1%
3700174 4.18.1.0 beta barrels › SH3 › Plus3 › Plus3 0.65 54.0 4.12e-01 100.0% 38.4%
3514906 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 55.0 3.77e-01 100.0% 27.9%
3989485 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.65 53.0 5.29e-01 95.9% 100.0%
5054738 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 56.0 5.42e-01 100.0% 96.4%
3936474 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 54.0 4.47e-01 100.0% 61.1%
3774108 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 53.0 4.43e-01 100.0% 55.8%
2561577 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.64 52.0 4.93e-01 95.9% 78.7%
3964422 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.63 52.0 3.74e-01 98.0% 33.1%
3164374 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.63 47.0 4.70e-01 85.7% 94.0%
5059258 109.4.1.95 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.62 46.0 3.06e-01 100.0% 19.1%
3626694 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.30e-01 100.0% 58.9%
3416068 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.62 47.0 3.46e-01 89.8% 35.5%
4963111 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.61 46.0 4.79e-01 85.7% 100.0%
3743386 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 44.0 3.03e-01 79.6% 44.3%
1405101 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.60 50.0 5.01e-01 100.0% 98.0%
3766764 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.60 44.0 2.89e-01 89.8% 31.2%
4647213 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.60 44.0 4.62e-01 81.6% 100.0%
4957377 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.60 49.0 4.61e-01 100.0% 79.4%
145704 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.59 49.0 4.69e-01 98.0% 84.5%
4027625 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.88e-01 98.0% 100.0%
4953223 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.59 48.0 4.82e-01 98.0% 100.0%
4119693 6064.1.1.0 few secondary structure elements › EAGR box containing domain in MG200 › EAGR box containing domain in MG200 › EAGR box containing domain in MG200 0.59 42.0 4.28e-01 89.8% 83.7%
4951012 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.58 48.0 4.79e-01 95.9% 94.0%
3964033 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.58 48.0 4.82e-01 100.0% 100.0%
4221708 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.56 44.0 4.13e-01 100.0% 85.7%
4245466 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.56 44.0 4.45e-01 95.9% 94.0%
3842150 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 42.0 3.04e-01 89.8% 50.3%
4945288 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 41.0 4.18e-01 95.9% 100.0%
3261052 376.1.4.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog 0.51 34.0 3.38e-01 79.6% 68.0%