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JX560521.1__AFU62266.1__phiAC-1_0017__00017
Bact-VirJX560521.1__AFU62266.1__phiAC-1_0017__00017
Identity
- Accession:
- JX560521 ↗
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-45
Domain cluster:
representative
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fqmA01 | 6.10.140.830 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 37.0 | 3.50e-01 | 85.0% | 39.1% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.73 | 43.0 | 3.12e-01 | 100.0% | 22.6% |
| 2bj3D02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.72 | 58.0 | 4.85e-01 | 100.0% | 56.8% |
| 2nyuB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 53.0 | 3.48e-01 | 92.5% | 18.7% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 56.0 | 4.59e-01 | 100.0% | 49.4% |
| 3keyA02 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.69 | 53.0 | 4.21e-01 | 87.5% | 50.0% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.69 | 55.0 | 4.40e-01 | 100.0% | 54.2% |
| 3c9gA01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.69 | 56.0 | 4.06e-01 | 100.0% | 61.1% |
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 52.0 | 4.64e-01 | 100.0% | 58.6% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.65 | 52.0 | 4.02e-01 | 100.0% | 57.5% |
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 45.0 | 3.13e-01 | 75.0% | 22.4% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 49.0 | 4.22e-01 | 100.0% | 51.2% |
| 3pgvA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.65 | 45.0 | 3.57e-01 | 80.0% | 33.7% |
| 4l4qA03 | 3.30.300.10 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.65 | 47.0 | 3.36e-01 | 80.0% | 83.2% |
| 7x0fA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.64 | 49.0 | 3.50e-01 | 95.0% | 75.7% |
| 7yj5A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.64 | 46.0 | 3.14e-01 | 80.0% | 77.4% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 49.0 | 4.43e-01 | 100.0% | 62.1% |
| 2plwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 48.0 | 3.27e-01 | 100.0% | 20.9% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.62 | 47.0 | 3.11e-01 | 97.5% | 43.3% |
| 7arcC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.61 | 48.0 | 3.52e-01 | 97.5% | 40.7% |
| 2pd1A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 46.0 | 3.81e-01 | 100.0% | 53.7% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 47.0 | 3.83e-01 | 100.0% | 47.4% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.61 | 49.0 | 3.76e-01 | 100.0% | 54.5% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.59 | 45.0 | 4.06e-01 | 100.0% | 57.4% |
| 2v4jB01 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 48.0 | 3.50e-01 | 100.0% | 29.5% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 40.0 | 2.45e-01 | 72.5% | 11.1% |
| 1t6sA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 3.40e-01 | 80.0% | 40.7% |
| 2pw4A00 | 1.10.3300.10 | Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain | 0.58 | 42.0 | 2.75e-01 | 80.0% | 21.3% |
| 4g41A00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.58 | 41.0 | 2.53e-01 | 75.0% | 74.2% |
| 4nohA01 | 3.30.70.3060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 42.0 | 3.80e-01 | 95.0% | 62.0% |
| 2b30A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.58 | 48.0 | 3.64e-01 | 100.0% | 74.3% |
| 1i6uA01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.57 | 42.0 | 3.79e-01 | 92.5% | 55.9% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 41.0 | 2.72e-01 | 77.5% | 56.3% |
| 1ln1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 43.0 | 2.88e-01 | 95.0% | 66.0% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.57 | 43.0 | 2.99e-01 | 85.0% | 67.9% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.56 | 44.0 | 3.81e-01 | 100.0% | 57.1% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.56 | 47.0 | 3.67e-01 | 97.5% | 82.6% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 43.0 | 3.74e-01 | 100.0% | 65.4% |
| 1xhsA00 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.56 | 40.0 | 3.07e-01 | 82.5% | 32.7% |
| 1nf2A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.56 | 41.0 | 3.30e-01 | 95.0% | 79.2% |
| 1z90B01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.56 | 39.0 | 2.36e-01 | 80.0% | 49.1% |
| 2zxiA03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.56 | 41.0 | 3.08e-01 | 80.0% | 73.2% |
| 2m9kA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 44.0 | 3.63e-01 | 100.0% | 50.5% |
| 2z86D02 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.55 | 43.0 | 2.76e-01 | 100.0% | 85.8% |
| 3rbtD01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 45.0 | 3.32e-01 | 100.0% | 59.2% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.55 | 33.0 | 2.98e-01 | 80.0% | 38.2% |
| 3lpxB02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.54 | 46.0 | 3.55e-01 | 97.5% | 52.1% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.53 | 41.0 | 2.47e-01 | 100.0% | 53.5% |
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.16e-01 | 80.0% | 40.2% |
| 2e55A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 45.0 | 2.92e-01 | 100.0% | 71.6% |
| 4c4aA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.53 | 36.0 | 2.38e-01 | 70.0% | 66.1% |
| 4bwxA03 | 1.10.287.3700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 40.0 | 3.13e-01 | 80.0% | 45.0% |
| 4ivkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 38.0 | 2.32e-01 | 100.0% | 20.5% |
| 4zxhA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.52 | 39.0 | 2.76e-01 | 87.5% | 72.4% |
| 2x7gA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 42.0 | 3.36e-01 | 95.0% | 46.6% |
| 2cxcA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 40.0 | 3.60e-01 | 100.0% | 71.0% |
| 4tshB01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 2.70e-01 | 97.5% | 30.1% |
| 2a07J00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.39e-01 | 100.0% | 47.0% |
| 3tbdA01 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.51 | 36.0 | 3.10e-01 | 87.5% | 98.8% |
| 2mhyA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 34.0 | 3.20e-01 | 70.0% | 75.4% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 36.0 | 3.05e-01 | 95.0% | 51.5% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5075945 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.76 | 63.0 | 5.42e-01 | 100.0% | 81.4% |
| 4978228 | 305.2.1.0 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) | 0.73 | 63.0 | 5.41e-01 | 100.0% | 75.4% |
| 3602523 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.73 | 60.0 | 4.89e-01 | 100.0% | 52.9% |
| 3931271 | 304.160.1.0 ↗ | a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF | 0.73 | 63.0 | 4.87e-01 | 100.0% | 56.7% |
| 4316087 | 230.2.1.0 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C | 0.71 | 51.0 | 3.73e-01 | 80.0% | 75.8% |
| 3584264 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.71 | 39.0 | 2.70e-01 | 92.5% | 16.8% |
| 4791706 | 304.126.1.4 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I_N | 0.70 | 58.0 | 4.89e-01 | 100.0% | 62.2% |
| 4523483 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.69 | 54.0 | 4.70e-01 | 100.0% | 61.3% |
| 5036199 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.68 | 55.0 | 4.69e-01 | 100.0% | 66.7% |
| 5073968 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.66 | 54.0 | 4.58e-01 | 100.0% | 64.0% |
| 3279969 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.65 | 54.0 | 3.54e-01 | 100.0% | 71.4% |
| 2076029 | 3012.1.1.4 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 | 0.65 | 45.0 | 3.56e-01 | 80.0% | 33.3% |
| 4932873 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.64 | 43.0 | 2.82e-01 | 72.5% | 59.0% |
| 3941213 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.63 | 43.0 | 3.24e-01 | 72.5% | 30.0% |
| 3812542 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 51.0 | 4.51e-01 | 100.0% | 69.2% |
| 4961913 | 304.8.1.123 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › HVO_0513_N | 0.63 | 51.0 | 4.55e-01 | 100.0% | 64.6% |
| 5047432 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.63 | 48.0 | 4.00e-01 | 100.0% | 52.2% |
| 3668248 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 48.0 | 4.10e-01 | 92.5% | 57.3% |
| 4940093 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.62 | 48.0 | 4.23e-01 | 97.5% | 68.6% |
| 4231117 | 328.3.1.2 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 | 0.62 | 46.0 | 3.56e-01 | 90.0% | 33.6% |
| 4943255 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.61 | 42.0 | 2.54e-01 | 75.0% | 18.2% |
| 4936959 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.61 | 49.0 | 3.78e-01 | 100.0% | 48.6% |
| 3250474 | 109.1.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_3 | 0.60 | 42.0 | 2.77e-01 | 100.0% | 16.8% |
| 3368713 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.60 | 45.0 | 4.01e-01 | 100.0% | 64.0% |
| 5043001 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.60 | 41.0 | 3.01e-01 | 72.5% | 52.4% |
| 5013605 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.59 | 43.0 | 3.09e-01 | 87.5% | 26.9% |
| 5023279 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.59 | 43.0 | 4.09e-01 | 95.0% | 68.3% |
| 3355814 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.59 | 41.0 | 4.17e-01 | 75.0% | 90.0% |
| 4964493 | 5001.1.1.292 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM | 0.59 | 46.0 | 2.99e-01 | 97.5% | 66.4% |
| 3812104 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 43.0 | 3.05e-01 | 95.0% | 54.9% |
| 4984140 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.59 | 44.0 | 2.96e-01 | 100.0% | 25.9% |
| 3218110 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.58 | 45.0 | 3.89e-01 | 97.5% | 60.0% |
| 3932224 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.58 | 42.0 | 2.55e-01 | 80.0% | 33.5% |
| 3348248 | 3012.1.1.14 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › KH_2 | 0.58 | 46.0 | 4.05e-01 | 100.0% | 78.6% |
| 4341023 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.58 | 42.0 | 3.88e-01 | 92.5% | 63.1% |
| 4991797 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.58 | 43.0 | 3.77e-01 | 95.0% | 53.8% |
| 3377432 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.58 | 40.0 | 2.28e-01 | 75.0% | 57.8% |
| 5051924 | 304.8.1.12 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 | 0.58 | 48.0 | 4.23e-01 | 100.0% | 72.3% |
| 4239881 | 328.3.1.2 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 | 0.58 | 42.0 | 3.19e-01 | 90.0% | 29.6% |
| 4978265 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.58 | 47.0 | 3.32e-01 | 100.0% | 28.7% |
| 5005295 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.58 | 49.0 | 3.50e-01 | 100.0% | 87.7% |
| 5019573 | 5001.1.1.292 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM | 0.56 | 48.0 | 3.00e-01 | 100.0% | 95.7% |
| 4941467 | 327.11.1.7 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd | 0.56 | 44.0 | 3.97e-01 | 97.5% | 73.8% |
| 5030033 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.56 | 44.0 | 3.95e-01 | 97.5% | 72.3% |
| 3972097 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.56 | 43.0 | 3.71e-01 | 97.5% | 73.3% |
| 4089496 | 387.1.5.42 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Myticin-prepro | 0.55 | 39.0 | 4.03e-01 | 85.0% | 97.1% |
| 3433011 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 43.0 | 3.28e-01 | 97.5% | 40.8% |
| 4961958 | 5001.1.1.292 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM | 0.55 | 43.0 | 2.83e-01 | 100.0% | 68.9% |
| 5057766 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.54 | 38.0 | 3.68e-01 | 82.5% | 84.0% |
| 3349668 | 208.1.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › UDPGP | 0.54 | 37.0 | 2.39e-01 | 72.5% | 25.0% |
| 4855517 | 101.1.2.9 ↗ | alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV | 0.54 | 46.0 | 2.92e-01 | 100.0% | 23.5% |
| 4981261 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.53 | 41.0 | 3.62e-01 | 100.0% | 56.0% |
| 3969345 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 44.0 | 2.80e-01 | 97.5% | 34.5% |
| 4226064 | 3433.1.2.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain | 0.53 | 40.0 | 3.99e-01 | 100.0% | 97.8% |
| 4026870 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.53 | 45.0 | 3.31e-01 | 97.5% | 40.9% |
| 4087731 | 327.11.1.7 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd | 0.53 | 42.0 | 3.74e-01 | 97.5% | 78.5% |
| 5081804 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.53 | 39.0 | 3.29e-01 | 82.5% | 46.7% |
| 5056052 | 327.11.1.7 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd | 0.52 | 39.0 | 3.51e-01 | 90.0% | 55.4% |
| 3710982 | 7581.1.1.1 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N | 0.52 | 45.0 | 2.75e-01 | 100.0% | 90.2% |
| 4961640 | 5001.1.1.292 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM | 0.52 | 45.0 | 2.79e-01 | 100.0% | 38.3% |
| 4161112 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.51 | 44.0 | 2.80e-01 | 100.0% | 70.2% |
| 5045170 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 38.0 | 3.25e-01 | 100.0% | 57.8% |
| 4029502 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.51 | 45.0 | 2.54e-01 | 100.0% | 31.6% |
| 5039869 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.50 | 40.0 | 2.84e-01 | 87.5% | 35.0% |
| 4965147 | 5001.1.1.292 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM | 0.50 | 40.0 | 2.59e-01 | 97.5% | 68.1% |
| 4402684 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.50 | 42.0 | 2.74e-01 | 100.0% | 73.3% |