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JX560521.1__AFU62311.1__phiAC-1_0062__00062
Bact-VirJX560521.1__AFU62311.1__phiAC-1_0062__00062
Identity
- Accession:
- JX560521 ↗
- Kingdom:
- phage
Quality
70.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-74
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k1rA01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.66 | 49.0 | 4.71e-01 | 79.2% | 88.9% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 43.0 | 4.53e-01 | 70.8% | 100.0% |
| 1oltA02 | 1.10.10.920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 46.0 | 4.46e-01 | 79.2% | 100.0% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 50.0 | 4.66e-01 | 91.7% | 95.7% |
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 4.00e-01 | 73.6% | 83.7% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 4.17e-01 | 70.8% | 100.0% |
| 2pjpA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 4.25e-01 | 73.6% | 100.0% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.58 | 39.0 | 4.01e-01 | 70.8% | 98.6% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 4.32e-01 | 81.9% | 100.0% |
| 1lddA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 40.0 | 4.01e-01 | 75.0% | 98.6% |
| 3hbcA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.56 | 41.0 | 2.79e-01 | 80.6% | 86.1% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.87e-01 | 73.6% | 95.7% |
| 2rrdA00 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.53 | 42.0 | 3.76e-01 | 86.1% | 62.4% |
| 1uaaA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 41.0 | 4.16e-01 | 95.8% | 83.8% |
| 4kc5B01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 45.0 | 2.81e-01 | 98.6% | 53.4% |
| 3f75P00 | 1.10.287.2250 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 38.0 | 3.79e-01 | 77.8% | 81.3% |
| 4fd7A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 42.0 | 3.09e-01 | 98.6% | 46.0% |
| 2vzyC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 43.0 | 3.25e-01 | 97.2% | 85.7% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.62e-01 | 94.4% | 77.6% |
| 2gbbB00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.50 | 42.0 | 3.32e-01 | 94.4% | 74.8% |
| 1rajA01 | 4.10.880.10 | Few Secondary Structures › Irregular › Poliovirus 3D polymerase; domain 1 (Nucleotidyltransferase) › Poliovirus 3D polymerase Domain 1 (Nucleotidyltransferase) | 0.50 | 30.0 | 3.65e-01 | 72.2% | 97.7% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4301644 | 101.19.1.0 ↗ | alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN | 0.62 | 44.0 | 4.36e-01 | 77.8% | 98.8% |
| 3181297 | 101.1.2.119 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tau95 | 0.61 | 46.0 | 3.39e-01 | 84.7% | 36.2% |
| 4010695 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 44.0 | 4.45e-01 | 76.4% | 94.3% |
| 3287678 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.60 | 42.0 | 4.08e-01 | 73.6% | 90.0% |
| 4109840 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.60 | 49.0 | 4.51e-01 | 94.4% | 99.0% |
| 3227729 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.60 | 49.0 | 4.42e-01 | 94.4% | 97.1% |
| 3571987 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.59 | 42.0 | 3.97e-01 | 76.4% | 84.4% |
| 4971744 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.59 | 42.0 | 4.07e-01 | 77.8% | 88.2% |
| 3575508 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 42.0 | 3.70e-01 | 77.8% | 80.0% |
| 1884678 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.59 | 41.0 | 4.05e-01 | 73.6% | 91.0% |
| 4989162 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.59 | 45.0 | 4.46e-01 | 84.7% | 98.7% |
| 3907235 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.59 | 34.0 | 2.42e-01 | 100.0% | 18.2% |
| 3597746 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.58 | 41.0 | 3.99e-01 | 73.6% | 88.7% |
| 4961693 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.58 | 41.0 | 4.04e-01 | 75.0% | 78.8% |
| 4996226 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.58 | 49.0 | 4.54e-01 | 100.0% | 91.0% |
| 3602284 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 41.0 | 3.94e-01 | 75.0% | 72.9% |
| 4961539 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.58 | 42.0 | 4.20e-01 | 77.8% | 88.0% |
| 4966069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 47.0 | 4.38e-01 | 90.3% | 95.6% |
| 3962221 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.58 | 40.0 | 3.96e-01 | 72.2% | 89.3% |
| 5066705 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 47.0 | 4.76e-01 | 94.4% | 95.7% |
| 4936335 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.57 | 41.0 | 3.66e-01 | 77.8% | 84.5% |
| 5053839 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 46.0 | 4.64e-01 | 93.1% | 100.0% |
| 3598541 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 39.0 | 3.83e-01 | 73.6% | 83.7% |
| 1088845 | 101.1.2.119 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tau95 | 0.56 | 43.0 | 3.28e-01 | 86.1% | 37.4% |
| 3944996 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.56 | 39.0 | 3.81e-01 | 73.6% | 100.0% |
| 3436562 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 42.0 | 4.18e-01 | 81.9% | 92.0% |
| 3976357 | 101.1.2.270 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF977 | 0.55 | 39.0 | 3.59e-01 | 75.0% | 66.3% |
| 3600152 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 3.85e-01 | 73.6% | 95.7% |
| 4319667 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.53 | 36.0 | 2.89e-01 | 72.2% | 66.5% |
| 4934479 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.53 | 42.0 | 3.17e-01 | 93.1% | 87.4% |
| 4608145 | 284.1.1.8 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase_3 | 0.53 | 43.0 | 3.79e-01 | 90.3% | 80.0% |
| 3798605 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 39.0 | 4.02e-01 | 79.2% | 95.4% |
| 4019332 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.53 | 37.0 | 3.53e-01 | 75.0% | 98.9% |
| 3678273 | 101.1.2.120 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDRGK | 0.53 | 37.0 | 2.93e-01 | 73.6% | 39.4% |
| 4948197 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.52 | 38.0 | 3.96e-01 | 86.1% | 87.7% |
| 3204194 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.52 | 37.0 | 3.43e-01 | 76.4% | 90.5% |
| 5027661 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.52 | 42.0 | 3.74e-01 | 97.2% | 74.8% |
| 4947285 | 314.1.1.50 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › HGTP_anticodon | 0.50 | 39.0 | 2.44e-01 | 86.1% | 44.4% |
| 3280061 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.50 | 37.0 | 2.92e-01 | 81.9% | 65.3% |