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JX676771.1__AFV50663.1__AF_050__00050
Bact-VirJX676771.1__AFV50663.1__AF_050__00050
Identity
- Accession:
- JX676771 ↗
- Kingdom:
- phage
Quality
92.4
mean pLDDT
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-62
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00088__D33-109
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01844.30 best | HNH | 43.0 | 5.60e-11 | 75.9% | 95.7% |
| PF14279.13 | HNH_5 | 38.9 | 9.50e-10 | 75.9% | 78.6% |
| PF13395.13 | HNH_4 | 26.9 | 5.30e-06 | 75.9% | 90.7% |
D2
medium
residues 63-117
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zg6A02 | 1.10.150.660 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.65 | 44.0 | 4.08e-01 | 70.9% | 97.2% |
| 3phuA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 48.0 | 3.52e-01 | 89.1% | 73.0% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 48.0 | 3.78e-01 | 98.2% | 69.4% |
| 2fdrA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 43.0 | 4.15e-01 | 85.5% | 91.0% |
| 2fi1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 43.0 | 4.19e-01 | 85.5% | 90.6% |
| 4ex6A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 43.0 | 4.13e-01 | 90.9% | 100.0% |
| 3f4sA02 | 1.10.40.80 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › | 0.55 | 40.0 | 3.86e-01 | 80.0% | 98.4% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 38.0 | 3.22e-01 | 76.4% | 51.5% |
| 1au7A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 39.0 | 3.68e-01 | 81.8% | 73.6% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.54 | 41.0 | 3.27e-01 | 87.3% | 81.5% |
| 8alzB08 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.53 | 38.0 | 2.97e-01 | 76.4% | 48.1% |
| 2acxA01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.52 | 35.0 | 2.46e-01 | 70.9% | 24.4% |