←Back to structures

JX863101.2__AGH62730.1__X__00053

Bact-Vir

JX863101.2__AGH62730.1__X__00053

Identity

Accession:
JX863101 ↗
Kingdom:
phage

Quality

80.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vicosavirus› Pseudomonas_phage_UFV-P2

TaxID: 1235661

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-52
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zpwX00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 44.0 3.88e-01 100.0% 79.3%
3b49A00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.56 42.0 2.97e-01 100.0% 54.4%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 41.0 3.50e-01 100.0% 89.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4974520 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.58 49.0 4.47e-01 100.0% 98.4%
None — 0.55 45.0 4.11e-01 100.0% 98.5%
5078127 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.51 41.0 3.52e-01 100.0% 91.8%
5015850 205.1.1.1 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.51 36.0 2.71e-01 82.6% 28.4%
3238099 304.9.1.25 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_7 0.50 34.0 2.66e-01 84.8% 25.9%