JX880072.1AFV51099.1MS_020__00020

Bact-Vir

JX880072.1__AFV51099.1__MS_020__00020

Identity

64.1 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_VPMS1

TaxID: 1233488

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 34-116

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3a6mB01	3.90.20.20	Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › GrpE nucleotide exchange factor, coiled-coil domain	0.72	60.0	5.50e-01	91.6%	72.2%
4dvyP03	1.20.120.1270	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CagA exotoxin domain III	0.71	56.0	4.49e-01	85.5%	43.3%
3owaB04	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.64	45.0	3.66e-01	74.7%	56.7%

D2 medium residues 279-340

PDB

D3 medium residues 341-392

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1z1nX01	3.90.10.10	Alpha Beta › Alpha-Beta Complex › Cytochrome C3 › Cytochrome C3	0.65	46.0	3.74e-01	75.0%	94.9%
7ewsB02	3.30.590.10	Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain	0.65	53.0	3.43e-01	92.3%	57.6%
3pvlA03	1.20.80.10	Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein ›	0.61	48.0	3.76e-01	88.5%	70.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5012672	150.1.1.0 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin	0.60	47.0	3.96e-01	86.5%	88.9%

D4 medium residues 393-548

PDB