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JX880072.1__AFV51111.1__MS_032__00032
Bact-VirJX880072.1__AFV51111.1__MS_032__00032
Identity
- Accession:
- JX880072 ↗
- Kingdom:
- phage
Quality
81.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-48
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l2pA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.62 | 48.0 | 3.60e-01 | 100.0% | 33.3% |
| 5eo9B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 47.0 | 3.64e-01 | 93.3% | 53.6% |
| 2g5gX01 | 3.40.50.11550 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 46.0 | 3.07e-01 | 93.3% | 99.0% |
| 2ckaA01 | 3.40.5.120 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.56 | 42.0 | 4.14e-01 | 91.1% | 89.8% |
| 2yuxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.40e-01 | 100.0% | 75.9% |
| 4dipH00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 38.0 | 3.12e-01 | 97.8% | 70.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3915527 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.62 | 49.0 | 4.33e-01 | 100.0% | 57.3% |
| 3629954 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.60 | 46.0 | 4.63e-01 | 93.3% | 93.3% |
| 3190961 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 50.0 | 4.39e-01 | 100.0% | 100.0% |
| 3183944 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 46.0 | 3.38e-01 | 100.0% | 32.4% |
| 2570789 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.57 | 44.0 | 4.33e-01 | 91.1% | 83.7% |
| 5031168 | 10.1.2.190 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › GH114_assoc | 0.54 | 43.0 | 3.20e-01 | 100.0% | 40.7% |
| 3920804 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 43.0 | 3.94e-01 | 100.0% | 100.0% |
| 3269110 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.53 | 43.0 | 3.40e-01 | 95.6% | 46.4% |
| 3309517 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.51 | 41.0 | 3.41e-01 | 95.6% | 51.8% |