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JX889246.1__AFV51336.1__X__00016

Bact-Vir

JX889246.1__AFV51336.1__X__00016

Identity

Accession:
JX889246 ↗
Kingdom:
phage

Quality

91.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Camvirus› Streptomyces_phage_phiCAM

TaxID: 1239386

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-98
PDB
Domain cluster: rep: MT701595.1__QPB09697.1__CPT_Shaeky_010__00010__D39-56_73-184
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25681.2 best Phage_TTP_17 57.7 1.80e-15 99.0% 46.6%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 31.0 2.78e-01 100.0% 34.8%
5aj3P00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.58 29.0 2.80e-01 85.6% 38.5%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.52 28.0 3.20e-01 80.4% 72.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030848 1.1.13.52 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_1 0.76 69.0 5.78e-01 100.0% 65.0%
3590380 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 69.0 5.57e-01 100.0% 55.0%
3964955 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 66.0 5.59e-01 100.0% 60.6%
3622225 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 33.0 3.62e-01 100.0% 67.5%
D2 high residues 108-165
PDB
Domain cluster: rep: OQ995441.1__WMI34740.1__SEA_MARAV_18__00017__D185-242