←Back to structures
JX901189.1__AGI12271.1__FF47_03__00004
Bact-VirJX901189.1__AGI12271.1__FF47_03__00004
Identity
- Accession:
- JX901189 ↗
- Kingdom:
- phage
Quality
77.7
mean pLDDT
Taxonomy
TaxID: 1305710
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-73
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kebA00 | 1.10.8.530 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase alpha-primase, subunit B, N-terminal domain | 0.73 | 60.0 | 5.33e-01 | 92.6% | 79.5% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 58.0 | 5.10e-01 | 94.4% | 78.3% |
| 1dcnA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.69 | 58.0 | 5.21e-01 | 90.7% | 70.8% |
| 1tj7A03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.69 | 57.0 | 5.25e-01 | 92.6% | 73.2% |
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.68 | 44.0 | 4.66e-01 | 70.4% | 75.0% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 56.0 | 4.90e-01 | 94.4% | 78.3% |
| 5nl9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 55.0 | 4.74e-01 | 90.7% | 98.8% |
| 3tw6B03 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 56.0 | 3.26e-01 | 100.0% | 13.5% |
| 2z4sA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 52.0 | 4.82e-01 | 92.6% | 86.1% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.63 | 49.0 | 4.37e-01 | 88.9% | 75.3% |
| 3vkhB07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 52.0 | 3.59e-01 | 94.4% | 100.0% |
| 1iqpA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 50.0 | 4.82e-01 | 94.4% | 92.2% |
| 1sxjD02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 50.0 | 4.72e-01 | 94.4% | 92.9% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 43.0 | 3.66e-01 | 70.4% | 52.3% |
| 7dkaA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 47.0 | 3.37e-01 | 94.4% | 61.5% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 40.0 | 3.77e-01 | 72.2% | 72.6% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 40.0 | 3.72e-01 | 72.2% | 73.3% |
| 3jr1A02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.58 | 48.0 | 3.37e-01 | 98.1% | 71.1% |
| 2w43A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 39.0 | 3.91e-01 | 72.2% | 70.2% |
| 2amhA00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.58 | 47.0 | 3.34e-01 | 98.1% | 95.9% |
| 4ynzB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.57 | 48.0 | 3.47e-01 | 100.0% | 66.7% |
| 2l95A00 | 1.10.287.2250 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 43.0 | 3.99e-01 | 94.4% | 83.7% |
| 1r71A02 | 6.10.250.140 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 42.0 | 4.22e-01 | 87.0% | 86.2% |
| 1q15D02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 46.0 | 2.96e-01 | 94.4% | 61.6% |
| 2f76X00 | 1.10.150.490 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Retroviral GAG p10 protein | 0.55 | 44.0 | 3.79e-01 | 98.1% | 82.0% |
| 3ly1A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.55 | 46.0 | 3.05e-01 | 94.4% | 82.2% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.72e-01 | 87.0% | 96.5% |
| 4p72A03 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.54 | 39.0 | 2.73e-01 | 100.0% | 21.1% |
| 3futA02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.53 | 39.0 | 3.78e-01 | 83.3% | 70.8% |
| 3mabA00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.52 | 48.0 | 4.08e-01 | 100.0% | 76.5% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 40.0 | 3.70e-01 | 87.0% | 77.5% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3265963 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.82 | 70.0 | 5.16e-01 | 94.4% | 83.7% |
| 3711598 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.81 | 70.0 | 5.29e-01 | 98.1% | 76.2% |
| 3373467 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.80 | 73.0 | 5.79e-01 | 100.0% | 81.9% |
| 3469499 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.80 | 72.0 | 5.17e-01 | 100.0% | 72.0% |
| 3596357 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.79 | 69.0 | 5.34e-01 | 100.0% | 80.0% |
| 3887909 | 148.1.3.5 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Pol_alpha_B_N | 0.78 | 63.0 | 5.65e-01 | 88.9% | 81.3% |
| 5080558 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.77 | 60.0 | 6.23e-01 | 85.2% | 100.0% |
| 1346828 | 103.5.1.3 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › IPMS_D2 | 0.76 | 60.0 | 4.93e-01 | 87.0% | 53.5% |
| 3698083 | 103.5.1.4 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › HCS_D2 | 0.76 | 61.0 | 5.17e-01 | 88.9% | 56.7% |
| 3184714 | 103.5.1.4 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › HCS_D2 | 0.75 | 61.0 | 5.90e-01 | 88.9% | 85.0% |
| 4952657 | 103.5.1.4 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › HCS_D2 | 0.75 | 59.0 | 5.79e-01 | 88.9% | 86.7% |
| 3722053 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.74 | 62.0 | 5.32e-01 | 92.6% | 76.5% |
| 3734658 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.74 | 61.0 | 3.60e-01 | 92.6% | 19.1% |
| 4953164 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.73 | 59.0 | 5.90e-01 | 88.9% | 87.3% |
| 3888953 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.73 | 60.0 | 5.10e-01 | 88.9% | 61.2% |
| 4973086 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.72 | 59.0 | 5.91e-01 | 92.6% | 96.4% |
| 4133648 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.72 | 57.0 | 4.90e-01 | 87.0% | 60.0% |
| 4341780 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.72 | 60.0 | 5.74e-01 | 96.3% | 84.6% |
| 3519328 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.71 | 57.0 | 4.81e-01 | 90.7% | 68.4% |
| 4419818 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.71 | 57.0 | 4.95e-01 | 88.9% | 61.2% |
| 4681319 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.71 | 57.0 | 4.91e-01 | 88.9% | 61.2% |
| 3297516 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.71 | 60.0 | 5.11e-01 | 92.6% | 61.2% |
| 4510528 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.70 | 59.0 | 4.98e-01 | 92.6% | 58.9% |
| 3995939 | 148.1.3.13 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 | 0.70 | 55.0 | 3.16e-01 | 90.7% | 41.4% |
| 3296177 | 103.5.1.4 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › HCS_D2 | 0.70 | 55.0 | 4.89e-01 | 88.9% | 60.0% |
| 4636891 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.69 | 58.0 | 4.95e-01 | 92.6% | 61.2% |
| 3928496 | 143.1.1.0 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain | 0.69 | 54.0 | 5.28e-01 | 92.6% | 88.3% |
| 4597969 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.69 | 58.0 | 5.16e-01 | 92.6% | 69.3% |
| 4927310 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.69 | 58.0 | 4.77e-01 | 92.6% | 55.8% |
| 4159135 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.68 | 58.0 | 5.07e-01 | 92.6% | 65.0% |
| 4330255 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.68 | 57.0 | 4.91e-01 | 92.6% | 61.2% |
| 5067754 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 53.0 | 5.34e-01 | 90.7% | 87.3% |
| 4990055 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 56.0 | 5.65e-01 | 94.4% | 92.7% |
| 4273496 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.68 | 57.0 | 5.00e-01 | 92.6% | 65.0% |
| 5058284 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.68 | 47.0 | 3.19e-01 | 74.1% | 23.3% |
| 5053956 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.67 | 54.0 | 4.63e-01 | 94.4% | 68.4% |
| 5036826 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.67 | 56.0 | 4.93e-01 | 92.6% | 65.0% |
| 4962469 | 101.1.2.925 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7344 | 0.66 | 44.0 | 3.18e-01 | 70.4% | 25.6% |
| 4067861 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 54.0 | 4.71e-01 | 94.4% | 76.5% |
| 4594380 | 148.1.3.49 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Hda_lid | 0.66 | 54.0 | 4.80e-01 | 94.4% | 78.8% |
| 4013995 | 148.1.3.23 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_6 | 0.66 | 53.0 | 4.63e-01 | 92.6% | 92.9% |
| 3391391 | 4177.1.1.16 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FAP206 | 0.65 | 54.0 | 3.36e-01 | 98.1% | 23.6% |
| 4046331 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 54.0 | 4.90e-01 | 96.3% | 77.3% |
| 4974262 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.64 | 52.0 | 5.07e-01 | 92.6% | 98.3% |
| 5004958 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.62 | 47.0 | 4.70e-01 | 87.0% | 96.4% |
| 4982784 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.61 | 48.0 | 4.75e-01 | 92.6% | 98.3% |
| 3934795 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.61 | 46.0 | 4.73e-01 | 94.4% | 96.0% |
| 3644157 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.60 | 48.0 | 4.82e-01 | 94.4% | 98.2% |
| 3886972 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 44.0 | 4.24e-01 | 92.6% | 90.8% |
| 3718681 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.56 | 45.0 | 3.63e-01 | 92.6% | 83.5% |
| 4097350 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 45.0 | 4.30e-01 | 96.3% | 78.5% |
| 3797352 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.56 | 42.0 | 3.26e-01 | 88.9% | 38.0% |
| 3990868 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.56 | 43.0 | 3.40e-01 | 85.2% | 55.0% |
| 3970447 | 102.1.1.14 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › TfoX_C | 0.54 | 46.0 | 4.13e-01 | 94.4% | 90.7% |
| 4956012 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.52 | 40.0 | 3.27e-01 | 83.3% | 70.5% |
| 3615878 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.52 | 42.0 | 3.51e-01 | 88.9% | 77.9% |
| 1933281 | 4126.1.1.3 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › LCIB_C_CA | 0.51 | 44.0 | 2.93e-01 | 98.1% | 45.8% |
| 4594197 | 1074.1.1.3 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › RNR_Alpha | 0.51 | 40.0 | 3.40e-01 | 100.0% | 83.5% |