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AGC34567.1

Arc-Vir

KC117378__AGC34567.1__HSTV1-22__00022

Identity

Accession:
KC117378 ↗
Protein ID:
AGC34567.1 ↗
Kingdom:
archaea

Quality

68.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kirjokansivirales› Shortaselviridae› Lonfivirus› Haloarcula_sinaiiensis_tailed_virus_1

TaxID: 1262530

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-37_54-151
PDB
Domain cluster: rep: IMGVR_UViG_2681813027_000001-2681813027-2682580667__D3-28_44-135
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 26.0 3.46e-01 95.2% 70.8%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 26.0 3.55e-01 95.2% 76.2%
2hhzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 47.0 4.63e-01 100.0% 80.4%
3f6gA02 3.30.160.340 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 23.0 3.18e-01 84.1% 74.6%
4nzjA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 34.0 3.95e-01 94.4% 90.8%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 46.0 4.52e-01 100.0% 86.9%
1xo8A00 2.60.40.1820 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 36.0 3.40e-01 77.8% 58.3%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5028935 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.77 28.0 3.85e-01 100.0% 62.9%
5004308 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 71.0 6.57e-01 100.0% 94.2%
4032554 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.73 68.0 6.18e-01 100.0% 84.2%
4140243 1.1.5.82 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 0.73 59.0 6.21e-01 98.4% 94.8%
5078836 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.68 56.0 5.93e-01 99.2% 100.0%
2471641 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.65 59.0 5.63e-01 100.0% 89.3%
3250947 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 35.0 3.62e-01 87.3% 74.8%