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AGC34578.1
Arc-VirKC117378__AGC34578.1__HSTV1-33__00033
Identity
- Accession:
- KC117378 ↗
- Protein ID:
- AGC34578.1 ↗
- Kingdom:
- archaea
Quality
75.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Kirjokansivirales›
Shortaselviridae›
Lonfivirus›
Haloarcula_sinaiiensis_tailed_virus_1
TaxID: 1262530
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-40
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e12A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.77 | 67.0 | 4.21e-01 | 100.0% | 20.2% |
| 5tgzA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.75 | 65.0 | 3.87e-01 | 100.0% | 13.0% |
| 4a64C03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.74 | 62.0 | 4.47e-01 | 92.1% | 42.0% |
| 6hrdA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.72 | 60.0 | 3.85e-01 | 100.0% | 19.9% |
| 1vb3A01 | 3.90.1380.10 | Alpha Beta › Alpha-Beta Complex › threonine synthase, domain 1, chain A › Threonine synthase, N-terminal domain | 0.66 | 46.0 | 3.73e-01 | 76.3% | 37.0% |
| 1z8sA02 | 6.10.140.360 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 44.0 | 4.33e-01 | 94.7% | 81.0% |
| 6ok0B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 44.0 | 3.14e-01 | 84.2% | 27.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3289345 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.69 | 57.0 | 4.00e-01 | 100.0% | 37.8% |
| 4958811 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 54.0 | 3.72e-01 | 89.5% | 77.8% |
| 4230646 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.33e-01 | 94.7% | 49.4% |