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AGC34591.1

Arc-Vir

KC117378__AGC34591.1__HSTV1-46__00046

Identity

Accession:
KC117378 ↗
Protein ID:
AGC34591.1 ↗
Kingdom:
archaea

Quality

90.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kirjokansivirales› Shortaselviridae› Lonfivirus› Haloarcula_sinaiiensis_tailed_virus_1

TaxID: 1262530

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-124
PDB
Domain cluster: rep: IMGVR_UViG_2617271222_000001-2617271222-2619159599__D7-108
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 42.0 5.56e-01 95.0% 89.4%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 41.0 5.35e-01 95.0% 92.4%
1xmkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 44.0 5.34e-01 97.5% 86.1%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 46.0 5.65e-01 98.3% 96.0%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 41.0 5.24e-01 97.5% 91.3%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 44.0 5.47e-01 91.7% 93.3%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 43.0 5.10e-01 100.0% 83.7%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 42.0 5.13e-01 86.7% 88.3%
1k78B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 4.64e-01 75.0% 100.0%
2wa0A01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.60 39.0 4.23e-01 100.0% 79.2%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 53.0 4.99e-01 100.0% 83.9%
4cgyA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.55 51.0 4.27e-01 97.5% 72.6%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3253833 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.87 46.0 6.10e-01 91.7% 91.4%
3505603 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 49.0 5.90e-01 95.0% 86.3%
3472278 101.1.2.206 ↗ alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH 0.84 49.0 6.21e-01 97.5% 94.7%
5041057 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 53.0 6.02e-01 90.0% 82.1%
4999554 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 47.0 5.40e-01 86.7% 83.3%
3466949 101.1.2.524 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7625 0.75 46.0 4.76e-01 74.2% 64.3%
4989321 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 45.0 5.53e-01 95.0% 96.0%
5061097 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 44.0 5.18e-01 89.2% 84.7%
4024456 101.1.2.663 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7602 0.74 47.0 5.38e-01 74.2% 86.7%
4391985 101.1.2.137 ↗ alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.72 46.0 4.69e-01 71.7% 65.0%
3571824 101.1.2.601 ↗ alpha arrays › HTH › HTH › winged helix domain › TBPIP, LZ3wCH 0.71 44.0 3.58e-01 100.0% 34.4%
3165321 101.1.2.280 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.71 47.0 5.38e-01 98.3% 90.0%
3169535 101.1.2.207 ↗ alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.71 46.0 5.07e-01 77.5% 80.0%
3932917 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 50.0 5.69e-01 91.7% 95.6%
5038626 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.70 48.0 4.51e-01 97.5% 57.9%
3380214 207.1.1.230 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WHD_ROQ1 0.70 49.0 3.35e-01 70.8% 30.8%
3264668 101.1.2.304 ↗ alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.64 37.0 4.49e-01 93.3% 89.3%
5071949 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.63 43.0 3.81e-01 99.2% 48.8%
None — 0.62 45.0 4.46e-01 96.7% 69.8%
5016606 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 56.0 5.29e-01 96.7% 97.1%
3209384 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.60 42.0 4.68e-01 100.0% 95.6%
135163 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.58 49.0 4.71e-01 90.8% 80.5%
5082043 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.58 48.0 4.59e-01 92.5% 75.7%
3588171 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.57 50.0 4.66e-01 92.5% 78.6%
2388330 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.57 50.0 4.78e-01 93.3% 82.2%
5032747 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.56 45.0 4.65e-01 90.8% 88.7%
4640327 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.55 47.0 4.57e-01 92.5% 83.8%
1935905 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.54 46.0 4.46e-01 99.2% 81.0%
3279756 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.54 46.0 4.39e-01 93.3% 79.3%
3630104 192.24.1.6 ↗ alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.51 48.0 3.26e-01 100.0% 95.5%