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KC131130.1__AGB07307.1__X__00193
Bact-VirKC131130.1__AGB07307.1__X__00193
Identity
- Accession:
- KC131130 ↗
- Kingdom:
- phage
Quality
65.0
mean pLDDT
Taxonomy
TaxID: 1262540
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 58-150
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 38.0 | 3.37e-01 | 90.3% | 44.7% |
| 2zylA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.57 | 43.0 | 3.86e-01 | 81.7% | 83.7% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.54 | 37.0 | 3.28e-01 | 71.0% | 59.3% |
| 7fjlA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.54 | 42.0 | 3.67e-01 | 81.7% | 85.4% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.54 | 44.0 | 3.64e-01 | 95.7% | 66.0% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.53 | 39.0 | 3.58e-01 | 87.1% | 59.0% |
| 7wffb01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 42.0 | 2.95e-01 | 86.0% | 99.7% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 37.0 | 3.21e-01 | 73.1% | 86.8% |
| 3ci0K01 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.52 | 40.0 | 3.91e-01 | 82.8% | 84.6% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 46.0 | 4.20e-01 | 97.8% | 92.6% |
| 1ge8A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 39.0 | 2.92e-01 | 81.7% | 46.2% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 39.0 | 2.89e-01 | 81.7% | 45.0% |
| 2b1xA02 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.51 | 40.0 | 3.63e-01 | 84.9% | 93.7% |
| 7q04F01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.50 | 38.0 | 3.66e-01 | 80.6% | 99.1% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 32.0 | 3.74e-01 | 93.5% | 95.2% |
| 3ju8A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.50 | 44.0 | 3.11e-01 | 96.8% | 80.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5016556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 45.0 | 4.56e-01 | 71.0% | 83.3% |
| 3958695 | 3484.1.1.2 ↗ | a+b two layers › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Glyco_hydro_64 | 0.63 | 47.0 | 3.95e-01 | 78.5% | 54.4% |
| 4964362 | 6030.1.1.1 ↗ | a+b two layers › Middle domain of ribosomal protein S2-related protein › Middle domain of ribosomal protein S2-related protein › Middle domain of ribosomal protein S2-related protein › DR2241 | 0.62 | 45.0 | 4.15e-01 | 75.3% | 94.2% |
| 4064452 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.62 | 39.0 | 3.40e-01 | 89.2% | 41.4% |
| 5004981 | 3335.1.1.0 ↗ | beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B | 0.62 | 41.0 | 4.74e-01 | 81.7% | 96.9% |
| 4971601 | 241.14.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C | 0.56 | 39.0 | 4.30e-01 | 94.6% | 95.7% |
| 3957605 | 243.1.1.35 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ORF_12_N | 0.54 | 39.0 | 3.91e-01 | 76.3% | 100.0% |
| 3900936 | 247.1.1.5 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,HAGH_C | 0.53 | 46.0 | 3.33e-01 | 100.0% | 50.5% |
| 3281552 | 881.4.1.3 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › DUF4245 | 0.53 | 41.0 | 3.65e-01 | 83.9% | 81.5% |
| 3618481 | 247.1.1.5 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,HAGH_C | 0.53 | 47.0 | 3.15e-01 | 100.0% | 49.9% |
| 5027066 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.52 | 40.0 | 3.65e-01 | 81.7% | 88.0% |
| 4142781 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.52 | 40.0 | 3.63e-01 | 81.7% | 88.0% |
| 4993189 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 32.0 | 3.82e-01 | 91.4% | 95.0% |
| 5072901 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.52 | 34.0 | 3.64e-01 | 75.3% | 78.8% |
| 3338677 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.52 | 40.0 | 2.78e-01 | 83.9% | 94.8% |
| 5063524 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.52 | 39.0 | 3.35e-01 | 83.9% | 81.7% |
| 3529118 | 5.1.4.111 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HPS6 | 0.52 | 45.0 | 3.03e-01 | 100.0% | 47.8% |
| 3332764 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.51 | 33.0 | 3.50e-01 | 80.6% | 72.9% |
| 4008896 | 11.1.1.1286 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27224 | 0.51 | 33.0 | 3.08e-01 | 86.0% | 48.8% |
| 3436743 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.51 | 41.0 | 2.81e-01 | 87.1% | 90.3% |
| 4983783 | 873.1.1.20 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF6125 | 0.51 | 37.0 | 3.16e-01 | 78.5% | 79.4% |