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KC139532.1__AGF88779.1__SP010_00665__00001

Bact-Vir

KC139532.1__AGF88779.1__SP010_00665__00001

Identity

Accession:
KC139532 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Andersonviridae› Felixounavirus› Salmonella_phage_FSL_SP-010

TaxID: 1173770

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 165-210
PDB
Domain cluster: rep: KC139529.1__AGF88774.1__SP010_00640__00001__D172-216
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20744.4 best gp37_trimer 58.6 6.90e-16 100.0% 46.3%
D2 medium residues 44-104
PDB
Domain cluster: rep: KC139529.1__AGF88774.1__SP010_00640__00001__D172-216
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20744.4 best gp37_trimer 26.6 6.60e-06 100.0% 56.8%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a0tA01 6.20.80.10 Special › Other non-globular › Glycosyl hydrolase fold › 0.87 80.0 8.03e-01 98.4% 98.4%
1st8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.66 50.0 3.61e-01 85.2% 50.5%
1tltA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.65 49.0 3.51e-01 82.0% 62.9%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.64 50.0 3.71e-01 91.8% 33.1%
4eqvA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.63 49.0 3.58e-01 85.2% 56.2%
4by2B00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.62 51.0 3.82e-01 91.8% 36.1%
2p3nA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.62 50.0 3.92e-01 90.2% 72.6%
1g0hA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.62 50.0 3.93e-01 91.8% 52.6%
3lv0A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.61 50.0 3.89e-01 91.8% 54.0%
3b5qA00 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.61 51.0 3.10e-01 98.4% 85.8%
4gdxB00 3.60.20.40 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit 0.59 44.0 3.14e-01 78.7% 90.5%
3s8zA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 48.0 3.18e-01 100.0% 53.5%
5c2vB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 48.0 3.09e-01 98.4% 64.5%
4tpsA00 3.30.310.250 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA 0.58 43.0 3.35e-01 82.0% 44.3%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 46.0 2.98e-01 96.7% 51.5%
3qmfA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.57 49.0 3.85e-01 98.4% 88.8%
1rwiA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 47.0 3.24e-01 100.0% 65.6%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 44.0 3.53e-01 86.9% 45.7%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.55 46.0 3.32e-01 98.4% 54.3%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 2.91e-01 100.0% 50.8%
5c33A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.54 43.0 3.13e-01 90.2% 68.3%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 36.0 3.48e-01 70.5% 62.0%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 2.73e-01 100.0% 62.4%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 2.88e-01 100.0% 90.1%
2hezA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.51 42.0 2.75e-01 98.4% 40.6%
2f2hA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 38.0 3.25e-01 85.2% 76.1%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 34.0 3.16e-01 72.1% 77.6%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 35.0 3.02e-01 75.4% 80.6%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
185629 79.1.1.8 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › gp37_trimer 0.87 81.0 6.89e-01 100.0% 66.0%
2701542 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.69 52.0 4.02e-01 80.3% 88.0%
3844285 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.68 55.0 4.17e-01 91.8% 95.5%
4817087 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.67 41.0 4.59e-01 70.5% 82.6%
4487231 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.63 53.0 4.08e-01 95.1% 89.3%
4943465 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.61 51.0 3.95e-01 96.7% 87.6%
3989816 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.60 48.0 3.66e-01 90.2% 68.0%
3602976 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 40.0 4.24e-01 72.1% 81.8%
3510850 3459.1.1.0 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.59 46.0 4.08e-01 86.9% 81.1%
3721564 5.1.4.321 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30361 0.58 47.0 2.82e-01 95.1% 42.1%
None — 0.57 46.0 2.87e-01 100.0% 43.6%
4499085 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.56 46.0 3.41e-01 95.1% 84.0%
4951973 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 38.0 3.99e-01 72.1% 83.6%
3812754 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.54 41.0 2.81e-01 83.6% 88.3%
4163835 11.1.5.56 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Zona_CL1 0.53 37.0 2.97e-01 77.0% 62.1%
4948153 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 34.0 3.25e-01 78.7% 57.1%