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KC139644.1__AGF89493.1__SP107_00666__00001

Bact-Vir

KC139644.1__AGF89493.1__SP107_00666__00001

Identity

Accession:
KC139644 ↗
Kingdom:
phage

Quality

93.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Andersonviridae› Felixounavirus› Salmonella_phage_FSL_SP-107

TaxID: 1173772

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-139
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qmhA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.66 42.0 3.19e-01 98.1% 28.4%
2p0wA03 1.10.10.390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.65 34.0 4.60e-01 80.2% 100.0%
6nmnA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.61 42.0 3.96e-01 70.8% 81.2%
3h49B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.59 43.0 3.09e-01 75.5% 79.9%
6todA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.59 41.0 2.95e-01 71.7% 86.2%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 37.0 3.45e-01 72.6% 48.6%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 44.0 3.74e-01 92.5% 49.7%
2d05A02 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.56 39.0 3.92e-01 72.6% 71.2%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.56 34.0 3.50e-01 70.8% 59.4%
5unhA02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.56 39.0 2.89e-01 71.7% 86.5%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 44.0 3.97e-01 84.9% 96.0%
2di3B02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.56 44.0 3.96e-01 86.8% 65.2%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.56 38.0 3.58e-01 76.4% 55.3%
4dveA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.55 47.0 3.96e-01 96.2% 82.0%
2wy4A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 42.0 3.86e-01 83.0% 93.5%
2oebA00 1.10.520.30 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain 0.54 43.0 3.81e-01 84.9% 99.3%
2mx8A01 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.53 37.0 3.70e-01 93.4% 68.1%
2xppA00 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.53 35.0 3.23e-01 100.0% 51.8%
3aq5A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 42.0 4.09e-01 86.8% 98.3%
3d8lA00 1.10.8.940 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein, phage p2 ORF12 0.52 35.0 3.75e-01 70.8% 92.3%
3cr3A00 1.25.40.340 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain 0.51 41.0 3.47e-01 89.6% 82.3%
7jv7B01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 39.0 3.56e-01 83.0% 96.6%
2kckA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 29.0 2.90e-01 96.2% 50.9%
2vvwA00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.50 41.0 3.61e-01 85.8% 82.7%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5022018 4973.1.1.0 ↗ alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core 0.67 37.0 4.38e-01 82.1% 80.0%
3648643 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.64 39.0 4.10e-01 71.7% 66.3%
5039781 5045.1.1.3 ↗ alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › V_ATPase_I 0.63 44.0 3.17e-01 72.6% 89.5%
3347336 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.61 36.0 3.83e-01 73.6% 64.2%
5055141 3896.1.2.1 ↗ alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase › CarS-like 0.61 47.0 3.90e-01 84.9% 92.5%
3608391 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.60 39.0 3.55e-01 78.3% 47.6%
3492714 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.58 48.0 4.04e-01 89.6% 98.3%
3980491 628.1.1.1 ↗ alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD 0.58 46.0 4.20e-01 86.8% 70.1%
3353615 101.1.10.21 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C 0.58 45.0 3.47e-01 84.9% 64.0%
3513473 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.57 41.0 3.66e-01 74.5% 100.0%
3711112 4198.1.1.0 ↗ alpha arrays › TerB-like › TerB-like › TerB-like 0.57 36.0 3.25e-01 99.1% 45.5%
1276701 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.56 35.0 3.32e-01 73.6% 50.0%
3295589 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 36.0 3.66e-01 98.1% 65.7%
3971340 628.1.1.1 ↗ alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD 0.55 48.0 4.16e-01 100.0% 72.6%
3536798 633.24.1.4 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › RIN1 0.55 42.0 4.37e-01 85.8% 87.0%
3619395 621.1.1.2 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 0.54 40.0 4.41e-01 91.5% 98.8%
3469936 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.53 37.0 2.85e-01 72.6% 88.6%
3375117 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.53 38.0 3.41e-01 72.6% 83.4%
4999090 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.53 35.0 3.36e-01 70.8% 55.4%
None — 0.52 44.0 3.66e-01 93.4% 87.9%
5040620 1075.1.2.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.52 45.0 3.61e-01 98.1% 90.9%
3518828 524.1.1.0 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p 0.51 37.0 3.28e-01 75.5% 87.3%
4931873 1075.1.1.12 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › CcmB 0.51 43.0 3.37e-01 91.5% 52.4%
5070617 1079.1.1.5 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD_2 0.51 41.0 3.22e-01 88.7% 85.0%
3974457 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.51 41.0 2.99e-01 87.7% 58.8%