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AGM11104.1

Arc-Vir

KC292023__AGM11104.1__HRTV4-10__00010

Identity

Accession:
KC292023 ↗
Protein ID:
AGM11104.1 ↗
Kingdom:
archaea

Quality

80.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kirjokansivirales› Haloferuviridae› Saldibavirus› Halorubrum_tailed_virus_4

TaxID: 1273752

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 82-189
PDB
Domain cluster: rep: MZ334528__UBF23499.1__HRTV-28-gp61__00062__D88-194
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zelA01 3.90.56.20 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › replication protein C, winged helix domain 0.72 49.0 5.16e-01 70.4% 77.6%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 45.0 5.20e-01 72.2% 92.2%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 44.0 5.02e-01 95.4% 97.3%
2pmyA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 35.0 4.07e-01 87.0% 83.6%
2vxzA02 1.10.10.1490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 42.0 4.61e-01 86.1% 95.4%
6pw7A01 1.10.238.180 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.57 34.0 3.91e-01 82.4% 84.0%
3buxB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 33.0 3.60e-01 81.5% 71.9%
2bl0C01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 33.0 3.80e-01 84.3% 85.3%
1nklA00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.55 36.0 4.13e-01 87.0% 92.3%
2bl0B01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 31.0 3.78e-01 85.2% 91.2%
2k7bA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 33.0 3.84e-01 85.2% 88.2%
3smvA02 1.10.150.750 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.51 27.0 3.12e-01 85.2% 68.8%
1bjfA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 34.0 3.74e-01 82.4% 83.1%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 4.43e-01 91.7% 97.1%
1ggwA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 32.0 3.77e-01 85.2% 95.7%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3728309 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 47.0 5.64e-01 99.1% 100.0%
3697342 101.1.2.33 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_beta 0.73 47.0 5.52e-01 99.1% 94.7%
3473498 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 5.39e-01 91.7% 94.1%
3175221 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 47.0 4.77e-01 71.3% 98.1%
3286028 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.65 42.0 4.87e-01 95.4% 94.7%
5049455 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.64 44.0 4.07e-01 71.3% 93.6%
5077789 101.1.2.948 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27297 0.64 43.0 4.28e-01 91.7% 65.2%
3678273 101.1.2.120 ↗ alpha arrays › HTH › HTH › winged helix domain › DDRGK 0.64 45.0 3.96e-01 75.9% 48.5%
3272289 101.1.2.53 ↗ alpha arrays › HTH › HTH › winged helix domain › Mnd1 0.63 46.0 4.24e-01 94.4% 59.3%
None — 0.62 45.0 4.21e-01 75.9% 61.5%
5083844 101.1.2.242 ↗ alpha arrays › HTH › HTH › winged helix domain › RepL 0.62 47.0 4.93e-01 96.3% 87.0%
5083571 101.1.2.242 ↗ alpha arrays › HTH › HTH › winged helix domain › RepL 0.61 49.0 4.85e-01 94.4% 80.0%
3262094 108.1.1.26 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.61 36.0 4.23e-01 88.0% 84.0%
3596115 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 44.0 4.19e-01 75.9% 83.2%
3699952 101.1.2.120 ↗ alpha arrays › HTH › HTH › winged helix domain › DDRGK 0.60 43.0 4.12e-01 75.9% 85.4%
3879257 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.59 40.0 4.39e-01 88.9% 83.3%
3932917 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 45.0 4.87e-01 96.3% 97.8%
4938040 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 52.0 4.64e-01 100.0% 78.0%
4195926 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 37.0 3.99e-01 86.1% 80.0%
3712015 101.1.2.53 ↗ alpha arrays › HTH › HTH › winged helix domain › Mnd1 0.56 46.0 4.04e-01 100.0% 60.6%
4928210 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 44.0 4.72e-01 95.4% 97.9%
3652954 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.55 35.0 4.05e-01 84.3% 93.3%
3569524 108.1.1.48 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_9 0.55 36.0 4.05e-01 85.2% 90.0%
None — 0.54 47.0 4.46e-01 98.1% 87.6%
3445779 101.1.2.245 ↗ alpha arrays › HTH › HTH › winged helix domain › PORR 0.53 43.0 4.15e-01 87.0% 80.8%
3279756 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.52 44.0 4.09e-01 93.5% 77.9%
4976528 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 47.0 3.86e-01 98.1% 92.1%
5006986 101.1.2.913 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_Lhr 0.51 40.0 4.09e-01 87.0% 85.7%
5032747 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.51 44.0 4.33e-01 97.2% 89.6%
5059989 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 40.0 3.95e-01 87.0% 88.3%