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AGM11289.1
Arc-VirKC292025__AGM11289.1__HHTV1-34__00034
Identity
- Accession:
- KC292025 ↗
- Protein ID:
- AGM11289.1 ↗
- Kingdom:
- archaea
Quality
73.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Madisaviridae›
Clampvirus›
Haloarcula_hispanica_tailed_virus_1
TaxID: 1273750
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-55
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 51.0 | 4.63e-01 | 83.6% | 56.0% |
| 5nx5B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.69 | 60.0 | 3.77e-01 | 98.2% | 29.5% |
| 2eb4D00 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.63 | 50.0 | 3.24e-01 | 89.1% | 18.8% |
| 4xviA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.58 | 45.0 | 3.46e-01 | 90.9% | 63.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.75 | 66.0 | 4.22e-01 | 100.0% | 22.1% | |
| 5057202 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.66 | 53.0 | 4.93e-01 | 90.9% | 95.7% |
| 4934485 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.62 | 53.0 | 4.83e-01 | 94.5% | 70.3% |
| 3693312 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 46.0 | 4.56e-01 | 87.3% | 80.0% |
| 3941460 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.59 | 46.0 | 4.41e-01 | 87.3% | 78.5% |
| 4009970 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.56 | 42.0 | 4.04e-01 | 83.6% | 69.2% |
| 3753093 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.52 | 38.0 | 3.64e-01 | 85.5% | 67.7% |
| 3640035 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 33.0 | 3.04e-01 | 76.4% | 44.7% |