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AGM11318.1

Arc-Vir

KC292025__AGM11318.1__HHTV1-64__00064

Identity

Accession:
KC292025 ↗
Protein ID:
AGM11318.1 ↗
Kingdom:
archaea

Quality

80.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Madisaviridae› Clampvirus› Haloarcula_hispanica_tailed_virus_1

TaxID: 1273750

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-138
PDB
Domain cluster: rep: IMGVR_UViG_2264867215_000001-2264867215-2265082380__D6-145
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 41.0 4.14e-01 77.6% 85.9%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 30.0 3.39e-01 90.3% 68.3%
3ci0J02 2.10.70.20 Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains 0.53 22.0 3.36e-01 78.4% 100.0%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.52 36.0 3.78e-01 72.4% 90.4%
3hy3A00 3.40.50.10420 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NagB/RpiA/CoA transferase-like 0.52 37.0 3.31e-01 83.6% 51.0%
3dorA03 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 47.0 3.80e-01 100.0% 95.3%
1y9kA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 38.0 4.04e-01 97.8% 92.0%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.50 23.0 3.27e-01 96.3% 98.3%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4293420 2008.1.1.13 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU 0.61 55.0 4.86e-01 100.0% 81.5%
3414564 2008.1.1.29 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 0.61 47.0 3.70e-01 82.1% 78.2%
4928779 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.61 55.0 5.26e-01 100.0% 96.1%
4489860 2008.1.1.13 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU 0.60 54.0 5.09e-01 100.0% 93.9%
3822590 2008.1.1.77 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C 0.59 45.0 4.78e-01 94.0% 92.2%
4284406 2008.1.1.13 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU 0.59 54.0 5.09e-01 100.0% 95.6%
5038690 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.58 50.0 4.74e-01 97.0% 78.1%
4971509 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.57 32.0 4.10e-01 98.5% 96.0%
3284582 2008.1.1.16 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.57 47.0 4.51e-01 97.0% 77.3%
3622133 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.54 39.0 3.17e-01 72.4% 44.8%
4998126 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.53 29.0 3.51e-01 88.8% 81.2%
4862261 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.53 37.0 3.85e-01 70.9% 99.2%
3207085 2008.1.1.82 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RRG7 0.53 48.0 4.18e-01 100.0% 66.5%
3743329 2008.1.1.82 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RRG7 0.52 47.0 4.22e-01 100.0% 72.2%
3505141 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.52 40.0 4.08e-01 94.8% 83.8%
1320672 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.52 36.0 2.96e-01 72.4% 43.3%
4943476 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 46.0 3.69e-01 100.0% 93.1%
11107 213.1.1.7 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB 0.51 42.0 3.94e-01 99.3% 73.2%
4979901 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.51 27.0 3.59e-01 91.0% 97.1%
3838560 2008.1.1.78 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_endonuc 0.50 42.0 3.70e-01 94.8% 61.5%
3970455 246.3.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.50 45.0 3.62e-01 100.0% 88.1%